Sol Genomics Network

Unigene SGN-U272486

Unigene Basic Information

Unigene ID:	SGN-U272486
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272486
mRNA sequence:	Length: 1621 bp

>SGN-U272486 Solanum tuberosum #4 (9 members)
ATGGTTATAAAGATTCATTGAATGCGGTTCTCCTTTTGAAATGACAGAGAACTTGCAGTTTTTCTCCTTCACATACAAGGATGGGAGTTG
GTTTTTAATTCAAGAAACTGTTTTTCCGAATACATGATCTTGTATTTACATTTGGAAAGAGGTTACGAGCAGTTGATTTTGTCTGTCATA
TATCTTAGATGCTTTCTGGTTCCTATATCTACGTATGGCAGGCCCATACGGTGCTTGAAATGAACTACACCGAGCAGCAACTTACTGCAG
CCGTTGTATCTGAAGGCTTACGACCCGTTCTAGCTGACCTTCAATCCGGTGCTCCAGCAAGTTTAGTCTCTTTGATAGAAAGATGTTGGG
ATAAAGATCCGCAAAATAGGCCTTCTTTTGATGATATTGTCGTGGAACTTGATTTCATTCTGGAACATGAAGTTCGAAGGGGCTGTATGG
AGAAGGCCTCAGGGGAAGCTTTTATTTCTTCAAATGGTGTTGATGCTGCAAATTTCCAAAGCTATCAGGAGAATATTAGCTGGTTCAGTC
AAGGTAAAGACTTTTTGAAAAGAGTTCCTACTGCCCTTGCTGCTAGCACATGGCTGGATTCTTCAGATGATCATATCTATAGTCCAGTTC
TGTCTTGGGGTTCCTTTGCATCATGTGGGAGAAGGGAAACAATGGAAGATAGACACTTCCTTATGCCTCAGTTGTGTGATGAAAAGGATA
TTCACATCTTTGCAATCTTTGATGGTCATCGAGGTTCAGCAGCTGCTGAGTTTTCCTCTGGAGCTTTGCCAGGATTGTTGCAGAATCTTG
GTTCAGTTTGCAGTCCCTCTGATGCGCTTTTTGAAGCATTCATAAAGACAGATGTTGCATTCAGGACACAACTTGATTCTTCTCGCAAAC
GCAAGGGAGCAGTTCAGAAAGATTGGCACCCTGGTTGTACTGCAATAGCTGCTCTTATCGTCAGAAACAAACTTATTGTTGCTAATGCTG
GTGATTGCAGAACAATCTTGTGTCGATCTGGGATCCCATATCCTCTAAGTAGGGATCATGTTGCAAGTTGTCTTGAGGAGCGGGAACGTA
TTACCCGTGCAGGTGGCCTTGTCAAATGGCAAGTGGATACATGGAGGGTGGGTGATGCGGCTCTCCAGGTCACAAGGTCTATCGGCGATG
ATGATCTGAAGCCAGCTGTAACTGCGGAACCTGAGATAACTTCAACTACTCTTTCTGCCGAGGATGAATACATTGTAATGGCGAGTGATG
GGCTTTGGGATGTTGTTAGTGAGAAAGATGTAGTGAACATAATCAGAGACACAGTGAAAGAAGCAGGAATGTGTTCAAAGAGGTTAGCGA
CAGAAGCTGCAGAAAGAGGCAGCAAAGACAATATAACTGTTATTGTTATTTTCTTACGTCCAGTTTCCACAGCCGAGAGAATCTATTAGC
TACCTCTGCTTACTTACTGGTATCATCATTCTTTGTAAATCAATTCATCACTAACTTATTTGGATCAGTTGATTATCTACGCTTTCAACT
TCTCTTTTTGGAAAAATCTTAAAATACATAATCAGTTGATTACCTTTTTAAGTTACCTTAAAAAAAGGTAGTAAAAACTCGAGGGGGGGC
C

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPC	leaf 6 week old	5062	3
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	22	PP2C-like	349
2	21995	PP2C-like	211
5	67169		2
1.1	101395	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	322
2	118451	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	125
5	129380	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824) Protein phosphatase 2C - Molecular Function: protein serine/threonine phosphatase activity (GO:0004722) - Biological Process: protein amino acid dephosphorylation (GO:0006470) - Cellular Component: protein serine/threonine phosphatase complex (GO:0008287)	23

Preceding Unigenes (2)

Unigene	Build
SGN-U248972	Solanum tuberosum #3
SGN-U251881	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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