Sol Genomics Network

Unigene SGN-U272487

Unigene Basic Information

Unigene ID:	SGN-U272487
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272487
mRNA sequence:	Length: 1062 bp

>SGN-U272487 Solanum tuberosum #4 (9 members)
GAATTGCTGACTCTTCTTTTCTATTAATAGCCTTTTAGCACTTACTTCCAAAGCTTCTTTATCCATGGTGTTCAGAGCAATTTATTCACT
AAAATAACTCAACTTCTTAACTGCATAAACTACCTTACCCAAAGAGAAACTTTCCATTTCCAAAATCCAAAATCCAAACTTTTTTCTTCC
TAAAAATACATATATTTTCCCCTGTTTCTTGATGATGAATCAATTGTATTCTGTTAAAGAGGAGTTCCCGGGGTCAAGTTCTGGTGGGGG
TGAGCCCCCACCGTTGACACCACAACCAATGGAAGGGCTTCATGACATTGGTCCACCACCATTCCTTACAAAGACATATGAAATGGTGGA
TGATTCAACTATAGATCATGTTGTTTCTTGGAACAGAGGAGGTCAAAGCTTCGTAGTCTGGGATCCTCATGCCTTTTCGACTACACTACT
TCCCAGATTCTTCAAACACAACAATTTCTCGAGCTTTGTCAGACAGCTAAATACTTATACGAATTAAGATCTGGTGATGTTCCTCTGATG
AATCCTTCAAGTTCTGGTGGTTGGTATAACCTATTAAAATATTCATCGTGCTGCGGACCCAAAAAAAAAAAAAGCACTAGTGTCAAGAAT
TGTTTGCTAAGATGGATCTTGGAAAAATTTGGAAGATGATGATACTAAGCTGCAGATGGGATTTGATTGTTGCAGGGATTTAGAAAGATT
GATCCAGAGAGATGGGAATTCGCAAACGAGGCATTTCTAAAGGGGAGTAAGCATCTTCTAAGGAACATCAAGAGGCGAAAAACGTCTAAT
TCTCCTACAGAGCAAGGTCTCGGTCCTTGTGTCGAATTGGGATTTGATGGAGAAGTTGATCGATTGAGGCGTGACAAGCAAGTTTTGATG
ATGGAACTAGTGAAGCTTAGGACAGAATCAACCAGAATACTCGAGCTTACATTCGATCTTTGGGAGGTAAAGTTACAAGGAAACAGAGAG
GAAGCAGCAACAAATGATGAATTCTCTAGGCAAGAGCTATGCAAATCCGGGAGTTTGTCAGCAGTTATCCAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	4
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	2

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	145	HSF_ETS HSF_DNA_bind	92
2	22076	HSF_ETS HSF_DNA_bind	76
5	56342	HSF_ETS HSF_DNA_bind	68
1.1	101510	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	95
2	118501	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	77
5	129018	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	62

Preceding Unigenes (1)

Unigene	Build
SGN-U246701	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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