Sol Genomics Network

Unigene SGN-U273393

Unigene Basic Information

Unigene ID:	SGN-U273393
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273393
mRNA sequence:	Length: 1432 bp

>SGN-U273393 Solanum tuberosum #4 (7 members)
CTTCTTTANCCGTACAAGGGTTTATTGTGCGTAATTGGGAAGCTGTGTTTCTTTCATTTGTATGTATAAGATTGCAGAAAGGATAATTGA
GTTGAATTGTGTTGTTGAAGTTGGGAATTATGGTGAAATCGTTTGAGAATGGGGTATCTGTTGCACCATTCTTGTTGAAGTGTTATGAAA
TGGTGGAGGATGAGTCAACGGACGGCTTGATTTCTTGGAATCAATCTGAGAAAAGTTTCATCATATGGGATGTTCCTAAATTCTCATCTG
AATTGCTTCCTAAATACTTCAAGCATAGCAACTTCTCCAGCTTCATTCGTCAACTCAACATCTATGGTTTCCATAAAACTGATACAGATA
GATGGGAATTTTTGAATGATAGCTTTGTCAAAGGCCAAAAGCATTTTTTAAAGAATATTGTTAGAAGGAAACAGTCCAGTGTGGCCCAAA
AGAAACCATCCCAGCTGGAGGAGATCAAGTCTTGTACATCTGAAGAAAGTAAGAATCTTGAACTGTGGAAAGAAGTTGAGAATCTTAAGG
ATGAAAGAAATGTTCTCACGCAGGAGTTAGTCAAGCTTAAGGAACACCAGCAGAATTCAGAGAGTAAGTTGATACTTCTACGAGAACAAC
TAAAAGTCAGGGAGAAAAATCAACAACAGATGCTTTCCTTCATTGTTATGGCTATGCAAAGCCCAAGTTTTTTGGTTCAGTTTTTCCAGC
CCAAGGAAAACAGTTGGTGTATGAGTGAGAATGGTAATAATATACTGAGTGAAGTTGAAGATGATTGCATAGATACACCATCCGATCGAG
CAATTGTGAGGTATCATCCTCCCACTCATGAAGAAGCTGCAGAGCCCCCCCTATGCGCTGAACCTGAACCTGCTTTGGATTCTCAGAAAC
CTATGGAGCTCGATTTTTCTTCCAATGAATTAAAAGATATGTTTTCCAATATAGATTTCTTCTCAGGATTAATGGATGAAAAGCTGCTTG
CTTTTGAAAATAGGGTCCCTCTTACTTTGCCATATTATCCTGATGATGAGAACTTGTTGGAACAGCTGCTTTTGTCCAGTCCAATAACAG
AGAATAAAGAAGGCGAAGTGATAGATAATCAAGCTTGCTCCCATGCTGTCATGGAGACTGACTTGTCATTCCAGCGAATAGAGTCTGGAA
CTTTTTCAGGTTCAGAGGAACCATTTCATAGTCTGGAAGATAAAAAGATGGAAATGGCTTTGCTGGAGACTCAGTCAGACAACTTAAGTA
ATATGGATATACTTACTGAACAGCTGGGGCATAGTAAATTCTGAAGGGAGCCCAACCCGCTTATACAAATTGCGAAGATCTATTGTTGAA
TCTTCCTTTCATTTTTAAACTCGTGAATATTGTAACTCAGTATGCATAGTTGAAATAGAAAAGAGCACTGTACTTGATCTAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	TUBS	Tubers	5976	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	145	HSF_ETS HSF_DNA_bind	92
2	22076	HSF_ETS HSF_DNA_bind	76
5	56342	HSF_ETS HSF_DNA_bind	68
1.1	101510	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	95
2	118501	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	77
5	129018	HSF/ETS DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Winged helix repressor DNA-binding Heat shock factor (HSF)-type DNA-binding - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565)	62

Preceding Unigenes (1)

Unigene	Build
SGN-U248986	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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