Sol Genomics Network

Unigene SGN-U275641

Unigene Basic Information

Unigene ID:	SGN-U275641
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275641
mRNA sequence:	Length: 1488 bp

>SGN-U275641 Solanum tuberosum #4 (6 members)
TGAATTTAATACCTTATGAATATGTTATATGCCGGCAAGGAACGGAGAAGCTGGATGCTACCTTGGGCTTGAACCCCACAGCACCAAAGA
AGAGCATGTTGGTGGTTTCTGAGTTTATTGGTTGCTCTCCATCTCTCAGTGGTGCAATAAGGGTCAATCCATGGAATATTGATGCTGTTT
CTGAAGCTATGGATTCTGCTTTAATTGTCTCCGAGGCAGAGAAGCAGATGCGGCATGAGAAGCACTATAAATATGTGTGCACTCATGATG
TGGCATATTGGGCTCAGAGCTTTTTGCAAGATCTTGAAAGAGCATGTAGGGATCATGTGAGAAGGAGGTGTTGGGGTATTGGATTTGGCT
TAGGATTCCGTGTGGTTGCTTTGGATCCTAGCTTCCGGAAACTGTCAGTTGAGCATATTGTATCTGCTTACAAAAGGACCAAGCACCGGG
CAATCCTTTTGGATTATGATGGTACAATGACAGTCAGAAACTCTATCAGCAAGGGTCCAAATGCAGAGGTTATTAGTATCTTAAACAGCT
TGTGCAGGGATCCAAAGAATATTGTTTTCATTGTTAGTGGAAAAGACACAAAAACTTTAACTCAGTGGTTTTCTTCGTGTGAAACACTAG
GGCTTGCAGCAGAGCATGGCTATTTTGTGAGGCCAAATCATGATGCCAAATGGGAAACTTGTGTTGCAGTAGTAGATTTTTATTGGAAGC
AGATTGCTGAGCCTGTAATGAGCCTCTACACAGAAACCACTGATGGTTCTTTCATAGATAGCAAGGAAAGCACACTTGTTTGGAATTACC
AATATGCAGATCCAGATTTTGGCTCATGTCAGGCAAAAGAGCTTCTAGATCACTTGGAAAGTGTTCTTGCAAATGAACCGGTTACTGTCA
AGAGTGGCCAGAACATTGTAGAAGTGAAGCCTCAGGGTGTCAACAAAGGTCTTGTAGCAGAACGTCTCCTAGAAACAATGCAGAAGAAAG
GAACAATACCAGACTTCGTGCTCTGCATAGGGGATGATCGATCAGATGAGGATATGTTCGAGGTTATAATGAGTGCTGTCGCAAGTGCCT
CACTTTCCCCCGTTGCTGAAGTGTTTGCTTGCACAGTTGGCCAGAAACCAAGTAAGGCCAAGTATTATTTGGAGGACACTACAGAGATTC
TAAGAATGTTGCAGGGCCTGGCTTCTGCTTCTGAGCATTCTGCTAAACAAGTTTCGATATCTCCTCAACGCGTAATCATCGACCGAGAAT
AGGCAAATGAATATCTGAAAAGGAAGAAAAAGAAACAAGATTGATAGAAGGCTTTCTTAAACAGATTCTATAAGTGTATTGACTGTTTCT
AATTAGTTAATTTTCCTTTGGGATGTTGTTATAGTTGTCTCTTAGAAATATTTCTTTTGTTTACCAATTGCTTTTAAGGTATGTTTGTTG
TCCACTTCAACTTGAAATTTAAACATAATTGTAAAAATAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	167	Trehalose_PPase	83
2	22144	Glyco_trans_20	55
5	56429	Glyco_trans_20	44
1.1	101548	Trehalose-phosphatase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: trehalose biosynthesis (GO:0005992)	77
2	118570	Glycosyl transferase family 20 - Molecular Function: alpha alpha-trehalose-phosphate synthase (UDP-forming) activity (GO:0003825) - Biological Process: trehalose biosynthesis (GO:0005992) Trehalose-phosphatase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: trehalose biosynthesis (GO:0005992)	51
5	129134	Glycosyl transferase family 20 - Molecular Function: alpha alpha-trehalose-phosphate synthase (UDP-forming) activity (GO:0003825) - Biological Process: trehalose biosynthesis (GO:0005992) Trehalose-phosphatase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: trehalose biosynthesis (GO:0005992)	37

Preceding Unigenes (2)

Unigene	Build
SGN-U258352	Solanum tuberosum #3
SGN-U266258	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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