Sol Genomics Network

Unigene SGN-U276005

Unigene Basic Information

Unigene ID:	SGN-U276005
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	276005
mRNA sequence:	Length: 1648 bp

>SGN-U276005 Solanum tuberosum #4 (5 members)
ATATCGTTGTAATTGTTATATACTAGTGGTAATTAAGTCCAGTCACTTGAGGTTAAATTTTCTGACTCTTTTTACCTCTCATTTCTGAAA
ATGGCAAGTGAAGTTCATTCAGTTGTTGATGCCCATTCTCCCCCGAAGACGCCAACGGTTTGCGTCACAGGAGCAGCTGGATTTATCGGC
TCTTGGCTTGTCATGAGACTCCTTGAACGCGGTTATAATGTCCATGCTACTGTTCGTGATCCTGAGAACCAGAAGAAGGTGAAACATCTG
TTGGAACTGCCAAAAGCTGATACAAACTTAACGCTGTGGAAAGCAGACTTGGCAGTGGAAGGAAGCTTTGATGAAGCCATTCAAGGCTGT
CAAGGAGTATTTCATGTGGCTACACCGATGGATTTCGAGTCCAAGGATCCAGAGAACGAAGTAATTAAACCAACAGTCAGGGGAATGCTA
AGTATCATAGAATCATGTGCTAAAGCTAACACAGTGAAGAGGCTGGTTTTCACTTCATCTGCTGGAACTCTTGATGTCCAAGAGGACCAA
AAACTCTTCTATGACGAGACCAGCTGGAGCGATTTGGACTTCATATATGCTAAGAAGATGACAGGATGGATGTATTTTGTTTCCAAGATA
CTGGCAGAGAAGGCTGCAATGGAAGAAGCTAAAAAGAATAACATTAATTTCATTAGCATCATACCACCACTGGTTGTTGGTCCATTCATC
ACACCTACGTTCCCACCTAGCTTAATCACTGCCCTTTCACTAATTACCGGGAATGAAGCTCACTACGGCATCATTAAACAAGGTCAATAT
GTGCATTTGGATGATCTTTGTGAGGCTCATATATTCCTGTATGAGCACCCCAAGGCAGAGGGAAGATTCATTTGCTCGTCCCATCATGCT
ATCATCTACGATGTGGCTAAGATGGTGCGACAGAAATGGCCAGAGTACTATGTTCCTACTGAGTTTAAGGGTATCGATAAGGACTTGCCC
ATAGTGTCTTTTTCATCAAAGAAGCTTATGGACATGGGGTTTCAATTCAAATACACTTTGGAGGATATGTATAAAGGGGCCATTGAGACT
TGCCGACAGAAGCAGTTGCTTCCCTTTTCTACCCGAAGCACTGCAGACAATGGAAAAGACAAAGAAGCAATTCCCATTTCTACTGAAAAC
TATTCAAGTGGCAAGGAGAATGCACCAGTTGCCAATTGTACAGGAAAGTTTACCAATGGTGAAATCTAGTACCGCAACCATACGAAATAA
AAAGGCGAGCTACCCTACCAACATGTTTTTCTTGGTTCATGATGGCTGTTTGAGGTTTTTCAATACAACATGAGTAAAATGGTCGATGAA
TATACGGAAATTCTCATCTTGCTTAATTCAGGCAGGTAGGCTATCAGAGAATTCTAGGTATATTTTGCAGGAAAAAAAAAAAACTAGAAT
CACTGCAGGATCTGGATCCTAATACAAGGACATATTAATATTCCATTTTATAAGCTTTGCACAAGCAAGATCTAATTTTATGGAAGAACT
GTTTTCAAGGCTCTTGCGTATCATTTGCCAAAACAATTACCATCTTTGGTAATCATTCTGGGAAACTAGAGATAATATTGATAATATACC
ATTTTTTTCATGTAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
dfr	dihydroflavonol 4-reductase	dihydroflavonol 4-reductase

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1
Solanum tuberosum	vSTmRNA		708	3

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	65	3Beta_HSD	184
2	22015	3Beta_HSD	144
5	56313	3Beta_HSD	89
1.1	101435	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	166
2	118460	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	116
5	129000	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	71

Preceding Unigenes (1)

Unigene	Build
SGN-U257466	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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