Sol Genomics Network

Unigene SGN-U280750

Unigene Basic Information

Unigene ID:	SGN-U280750
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	280750
mRNA sequence:	Length: 631 bp

>SGN-U280750 Solanum tuberosum #4 (3 members)
CTTCTTCTTCTTCTCGGGCTTTCTGCAAAAATTGTATCCAAAACGTTGATTTTCCAGTGAATCTTAAATAATTTGAAGTGAGAAGAGAAT
GACAAAGAAGCGAGAAGTAGAAGATGGCATGGTGCCTGAGGAGTCGAATGCAAAACGGCAGAAGGTAATGGATCAGTCGTCTCCCTCTCT
TCCACCAGTTGCTTTTGAGAATCCACTTCTTCCACTTGCATCTTATGATGATGATGAAGACGACGAGGATGCTGGTGGGAAAGGACACAT
TGCTGAGCAAGTTATAAATAATGGTGGAGACAAGGAGCAAAATGGCTACTCATCTGACGACGAAGAAGATGAGGATGATGGTAGAAGCCA
AGGGAAGCGAAATCGTGCAATTGAGATTAGGAGGGATTGCCCCCATCTTGATACTGTGAATAGACAGGTCTTGGATTTTGACTTTGAGAA
ATTTTGTTCGGTCTCTCTCACAAATTTAAATGTGTATGCATGTTTAGTCTGTGGGAAATATTTTCAAGGAAGGGGACCAAAATCCCATGC
GTATACACACAGTCTTGAAGCAGGACACCATGTGTTCATCAATTTACGAACAGAGAAAGTTATTGTCTTCCTGATGGATATGAAGTCATA
G

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	45	MATH	248
2	24038	Znf_C2H2 Znf_UBP Peptidase_C19	9
5	59795	Znf_C2H2 Znf_UBP Peptidase_C19	6
1.1	101414	TRAF-like	237
2	120802	Zinc finger UBP-type - Molecular Function: zinc ion binding (GO:0008270) Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 - Molecular Function: cysteine-type endopeptidase activity (GO:0004197) - Molecular Function: ubiquitin thiolesterase activity (GO:0004221) - Biological Process: ubiquitin-dependent protein catabolism (GO:0006511)	8
5	131463	Zinc finger UBP-type - Molecular Function: zinc ion binding (GO:0008270) Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 - Molecular Function: cysteine-type endopeptidase activity (GO:0004197) - Molecular Function: ubiquitin thiolesterase activity (GO:0004221) - Biological Process: ubiquitin-dependent protein catabolism (GO:0006511)	7

Preceding Unigenes (1)

Unigene	Build
SGN-U254035	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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