Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U578898 in the current build, Tomato 200607 #2

Unigene SGN-U312426

Unigene Basic Information

Unigene ID:	SGN-U312426
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	312426
mRNA sequence:	Length: 1332 bp

>SGN-U312426 Tomato 200607 #1 (33 members)
AAAAGATGAACTTTTGAATTCTCAATTGATCTGCTATTTTTGACTTCAACAGTGGTGAATTCATCGGAATTTATACAGATACACAGGTTT
TTGTTTTCCGGCCGAAACCATGCCGGAGCTTGTTCAAGCAGCACAAGTCTACGCGCCGACGAGAACTCTACAAATTTGGAAATCGCTACT
GAACTGGCTAGCTTTCTTCTTCCAGATCTTTGTTCAGATCCTCAAAGGAACGCCTTGTGTAACTCAGGTTCTCTCCTACTTTGGCGTTCG
CAATAGCTCTCTTCTCTCTTCCTCTCCACAGTTCAAGCCGCTGCCTGACGTTGAGCCACCGGAAGAGGAGGAGGCGCCGCCGCCGTCATC
CGTTGCTCTATCGACTCTGCAAATCACAACCGGAAGTGTCCCGATCAGTGTCGAGGAGGAACATTTACAGAAGCTCACGGTAGTTCTTGA
CTTGGATGAAACTTTGATTTGTGCATATGAGACATCAAGTTTGCCAACCATCATTTGCACCCAGGCAACAGAGGCTGGGTTGAAGTGGTT
TGAGCTTGAGTGCGTATCTTCCGAAAAGGAATATGATGGGAAACCTAAAATCAACCATGTCACAGTTTTTGAACGTCCTGGATTACATGA
GTTCCTAAAACAACTTAGCGAGTTCGCTAATCTGGTCTTGTTTACTGCTGGACTTGAAGGATATGCTAGACCTGTTGTTGACAAAATTGA
CCTTGAGAATCTGTTTAGCCATAGACTTTATCGTCCTTCAACTATTAGCACGGAATTCCGGGAACATGTGAAGGATCTGTCATGCATATC
AGAGGATTTATGCCGAGTTGTCATTGTTGATAACAACCCATTTAGTTTCTTGTTACAGCCTTTAAATGGAATCCCGTGCATTTCATTTTC
TCCTGGACAACCCTATGACAACCAGCTTTTGGAAGAAATCCTTCCACTTCTCAAGCATCTATCTGAGCAGAAGGATGTAAGGCCTGTGCT
TCGCGAAAGGTTTCAAATGCCCGAATGGTTCCAAAACCATGGAATCCCTACTTGTGAATTCACAAATTTACGATGATCTTGGCAAATAAA
TATTCTTGCTATTCCAGGAGGTGCAACACACCTATACTCTAAATTTGTTGTACAAGGTTAGTACCTCTTCACCGGAAGAACAAATTTCTG
TATAGATTATTTGTTCAGGAGTATCCGCCTTCTATGAAGACCCAAATTTCTTATCTATAGATTCTTTTGTAACTTTGTTTATAGCTTCCA
ATTGTGAGAAGAAATTCATGTATGCGCAATTATTATAAATAGTGATTTCCAATATTTATAACTTCACTCACA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (12)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	cTSC	seed	2256	2
Solanum lycopersicum	cTSD	seed	1504	16

mRNA member sequences (33)

Alignment image suppressed for unigene with 33 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101661	NLI interacting factor	49
2	120780	NLI interacting factor Dullard-like phosphatase domain - Molecular Function: phosphoric monoester hydrolase activity (GO:0016791)	8
5	131031	NLI interacting factor Dullard-like phosphatase domain - Molecular Function: phosphoric monoester hydrolase activity (GO:0016791)	8

Preceding Unigenes (1)

Unigene	Build
SGN-U213071	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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