Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U580933 in the current build, Tomato 200607 #2

Unigene SGN-U312565

Unigene Basic Information

Unigene ID:	SGN-U312565
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	312565
mRNA sequence:	Length: 1196 bp

>SGN-U312565 Tomato 200607 #1 (25 members)
TAATTAAAAACTTGGAATTTCGTTGAAAGTGTTTGGAGCCTTAACCTCTAAGACACCTAACGTGATTATTAAATTGGGGACATCCAGAGA
TCGGGTCCCAAAATAGTGAGTCGGACCCTAGTTTCTTCACCCCACAATCTCCGTCGAACTGGCGATGATCGATAACATCGATGATATCAT
CAACTGGGACGATGTAGATCACATCTTCCACAACGTTCTAGACAATCCCGACGATGATCAATTCACTCTTCATGATTCCTCCCCACAGTC
ATTCCAGCAGATCGAGCAGCTTCTTATGAACGATGACGATTTCGGTCTTGTCTCTGATCCTCAGTTTGCTGCCGAATCTCTTTCTGACTT
CCTCGTCGATTCTCCTCTTCACTCCGATCATTCTCACTCTCCTGCTGAACAAGCCATTGGATTCTCCGATCCCAAGGTTTCAAGTGCCGA
TCAGGACAAACACAAGGTTTCCCAGTCGCCTTCTGACGGCGACGACGAACTAAACAACCATGACCCCGTCGATAAGAAGCGCAAGAGGCA
ATTGAGGAATAGAGATGCAGCTGTGAGGTCACGAGAGAGGAAGAAGTTGTACGTTAGGGATCTTGAGTTGAAGAGTAGATACTTTGAATC
AGAATGCAAAAGGCTGGGGTTTGTTCTCCAGTGCTGTCTTGCTGAAAATCAAGCTTTACGCTTTTCTTTGCATAATAGCAGTGCTAATGG
TGTTTCTATGACCAAGCAGGAGTCTGCCGTGCTCTTTTTGGAATCCCTGCTGTTGGGTTCCCTGCTTTGGTTCCTGGGCATCACATGCCT
GCTCATTCTACCCAGCCAAACCTGGTCAGTTCCAGAAGAAAGTCAGGGAAGCAGAAACCACGGGCTTCTGGTTCCAATAAAGGAGGGAAA
AAAGACTAGTCGGATTTTGTTGTTCCTGTCCTTCATGATGAGCAAAAGATGCAAAGCTTCAAGATCGAGGATGAAGCTCAACCCCCATCC
CTTGGGAGTTGTGATGTGACTCGTTGTGATCAAATCTTTTCCCATAGGTGGATCATGGTTCCTTTTGAGTTCTTTAGTTTTTTATCAGAG
ATTCTCTTGTATGTGTCTTGCTTTGACATCTGAAGGATGAAGTTCACTGTTATTAGTTAATGACTTATGAGCTATATAATATCTATGCAA
CTTTTTAATAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	5
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (25)

Alignment image suppressed for unigene with 25 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 2 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101428	Basic-leucine zipper (bZIP) transcription factor - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) - Molecular Function: protein dimerization activity (GO:0046983)	192
2	125169		3
5	135523		3

Preceding Unigenes (1)

Unigene	Build
SGN-U213210	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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