Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U567176 in the current build, Tomato 200607 #2

Unigene SGN-U313633

Unigene Basic Information

Unigene ID:	SGN-U313633
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313633
mRNA sequence:	Length: 1343 bp

>SGN-U313633 Tomato 200607 #1 (74 members)
CAACAATACAATTTTCCTTCGATTTGCCTAATTCTCAGGTAATTTATCAAATTCTCTTGCTTTGATCTGCATGTATTTGATTTTTATCTG
TAAATTAATGTCCGCTTGAAGGAACAACAATACAATTTTCCTTCGATTTGCCTAATTCTCAGGTCATCTTTCCAGCTCCACTTGGTTGTG
TAGTGAATCTTTTTCCAAGAAAACTTTTTATTTGGAGATGGCTGAGGACGGTCACAAGGTTATCTTAAACGTCTATGACTTGAGTCAAGG
TTTAGCTCGACAGTTATCTACTACTTTTTTGGGAAAAGCTATTGAAGGAATATGGCACACAGGAGTAGTGGTTTATGGTCATGAATATTA
TTTTGGAGGCGGTATACAACATGCTCCAGCTGGGACGACACCATATGGGACTCCTATTAAAGTTGTAGATCTGGGTGTCACCCACATACC
AAAGGATGTCTTTGAAATGTATTTGCAAGAGATAAGCCCTCGGTATACTGCAGAGACATACAGTTTGCTTACCCACAACTGCAACAATTT
CAGCAATGAGATTGCTCAATTTTTGGTCGGTGCAACCATTCCAGAATATATTTTGAATCTTCCTAATGAGGTTACAAATAGCCCGATGGG
TGCCCTTATAATGCCTATGATACAACAACTGGAATCAACGTTGAGGGCTAATGCAGTACCACAAGCACCCCAGTTCCGACCAGCTACTGT
TGCTCCTGCTTCCCAGCCGACACTTTCTGTTGGGAAGTCCTCTAGTAGCGGTATTAATCAATCCAAAAAGCCCGAGAGCCAAGATGGAGA
GAAGAAGAATGTTAATGTGCCCTCTGCGGTCAAACCTGTGGAAGAGCAGGAGAAGACGCCTGCTAATGCGGTTGTGAAAGATCCTCTTGG
TGATGCTCGGAGCAAGGTACAAGAGGAAATCACCCGTGAATTTGCTGCAATCATGGCTACTGGGACATTGCGTGCAAGTGAGGCTGCTGC
TTTAGCAACTAAAAAAGTTATGCAAAGATATGGAGATACATTTGCTGCTATGAATTAATGACAACGAAGTTGTCTTTATAAATTCATCTG
TATTGGAAATTTAATATCCAACTGATTTGATGTAAGGTAGACTTATTGGATGCTTAGTAGGAGATGAGCAAACATTCTTCCTTGAAAGAG
ATCCGCATTATTGTACTCTTTCTGGACTTCATACATTGAATAAGTTCACTTTTTACAACTAAAAAAAAAAAAAAAAAACATGAGACTAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAANNNCCGGGGGGGGGGGGGGGGGACAATTTTTCCCTTTTAGGGGGTGTAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	4
Solanum lycopersicum	LA	Leaf Mature leaves	6589	7
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	8
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	5
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	28
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	4
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (74)

Alignment image suppressed for unigene with 74 aligned sequences.
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Markers Information (0)

Expression Data (6)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101536	Protein of unknown function DUF247 plant - Molecular Function: molecular function unknown (GO:0005554)	83
2	122425	Protein of unknown function DUF862 eukaryotic	5
5	132611	Protein of unknown function DUF862 eukaryotic	5

Preceding Unigenes (1)

Unigene	Build
SGN-U213670	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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