Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U568028 and SGN-U568029 in the current build, Tomato 200607 #2

Unigene SGN-U316514

Unigene Basic Information

Unigene ID:	SGN-U316514
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316514
mRNA sequence:	Length: 2610 bp

>SGN-U316514 Tomato 200607 #1 (26 members)
GCAAAACCCAACCTATTAAAGCTCGCTCACTACCTACCAGAAAACCCTACTCACTCTTCAAGAGAATCTGCTGCCAAATGCCTTCTTTTG
CCGCTTGAAGCTCCTTCTGGAAAATTCAGGTGTCATTCTTGAACACTTAAATCTTGCAAGAAGGGGGAGTTCTATGGATTATAGCTCCGG
GGAAGACACTGATATAAGTGAATCAGAGATTGAAGAATATGGAGAAAAATCTTACGAAGATTTGAAGAGCGGAAGCCGTTCTCTTAAGAT
ATCAGATGTGGCATATACTTGCCCATATTGTCCAAAGAAAAGAAAGCGTGACTTTTTGTACAAGGAACTCGTACAGCATGCAAGTGGGGT
GGGAAGCTGTAGCTCCAATAAAAGAACTGCAAGAGAAAAGGCGAATCATCTTGGGTTGGCAAAGTACTTGGAAACTGATGCTGCAGTTGC
TGCTGATTCATCTAAACCTGATGCCGAGCCAGATACTCAAACTGACCCTCTTGCGGATCATGACCGTGATGAGATGTTTGTCTGGCCTTG
GATCGGGGTTGTTGTGAACATTCCTACTGAATACAAGGATGGACGCAATGTGGGAGAAAGTGGTTCTAAGCTGAGGGATCAGTTGACAAG
GAGAGGTTTCAACCCTACAAGGGTACGTCCTCTGTGGAATTACCAAGGCCATTCTGGTACAGCTCTTGTTGAATTCAACAAAGACTGGTC
AGGATTTGGTAATGCAATGGCGTATGAGAAGGCTTATGAGGCTGACCATCATGGCAAGAAGGACTGGAAAGTCAACCATAGTAAAAACTC
TGATCTGTATGCTTGGATTGCTCGTGCCGATGACTATAAAGCTATTAATATCATCGGTGAAAATCTCCGCAAGGTTGGAGACCTTAGAAC
CATTTCCGATATCATGGAAGAAGAAGCTCGGAAGACGAACAAGCTCGTTTCTAATTTGACAAATGTTATTGAAGTCAAGAAGTTACACCT
AAAGGAGATGGCAGACAAATTTAAGGAGACTTCACAGTCTTTGAAACAATTGGTTGAAGAGAAAGATAAACTGCATCAAGCGTACAATGA
AGAGATAAGAAAAATCCAGTCAAGTGCACGTGATCATTTCCAGAAGATATTTAATGATCATGAAAAGTTGAAATTGCAATTGGAATCGCA
AAAGAAAGAGCTTGAGCTACGAGGTAGAGAACTGGAGAAACGCGAGGCGAAAAATGAAAGTGATAGGAAGAAACTGTCTGAGGATCTTGA
ACAGAATGCTACTCTAAATACCTCACTTAGTGCCGCAGCTGAAGAGCAAAGAAAGGTTGACGAGAAAGTACTGAAATTGGCTGAAGAGCA
GAAGAGGCAAAAGGAAGATCTCCATAAGAGAATAATTCAGCTGGAAAAACAACTTGATGCGAAACAAGCGGTAGAGCTTGAAATTGAGCA
GTTGAGAGGGTCATTGAACGTGATGAAACATATTGAAGATGAAGGTGATCAAGAAGTTTTGAAAAAGGTGGACACACTCCTTAAAAGTTT
AAGAGAGAAGGAAGAGGAATATGATGGTTTGGAAGCATTAAATCAAACTCTGATAGTGAAGGAAAGAAACAGTAATGATGAGCTGCAAGA
CGCTCGCAAAGAATTGGTTAATGGTTTGAAGGAACTACCGAGAGTTGGTCCAATTGGTGTTAAGAGGATGGGGGAGCTTGACAACAGACC
ATTCCATGAAGCAATGAAGAGGAACTATAATGAGTCAGAAGCAGATGAAAGAGCTACAGAGTTATGCTCATTGTGGGAGGAATACCTTAG
AGACCCTGGATGGCATCCCATTAAAGTCGTTATGATTAACGGGAAACCTGAGAATGTTATAGACGAAGAAGATGAAAAGCTGAAAGACTT
GAAAAGAAATTATGGTGAAGAAGTTTGCAAAGCTGTGACAGCAGCTTTGATGGAGGTAAACGATTACAACCCGAGTGGAAGATACATCAT
CTCAGAGCTGTGGAATTATGCGGTGAATAAGAAAGCTACTTTGGAGGAGGGAGTTACTGTGTTACTAAACATGTGGAAAAAGAAGAGAGG
ATCTGATTGAGGCTTCTATGTGCTTTCCTTAGCCGTTTAGGCAGCCCCAAGAATGGGGTGGGTGTGATAACATGTGACAACAACTTCAAA
CTCGTAATAACTATTAGAACCATGAATTCTTGTGTGAATAAGATGCACTCTGTGTTCCGATTACCCTGTCGTTTATTTTATTTGGGGGGT
TGAGCTTCCTCCTCCTGTGACTTAATCATAAGGATAAGGTTTTCAATGCCATTTAGTTGGTGAGATATGTAGTGTGAGATGCAGGTATGT
CAATTCTTGCAAGAGCACTGTCATCTTCCAAGTCAGGTAATGGAGTCTAATAAAGTAAACTATAACAACTCAGTGAAATCCCTACAACTA
TGTATGTAGATGCACTGAATAACTCTAATCTAATGTTCATGTCTCTCCGAGTATTGTATATTGCTGCCAATATCTTCTTCTTGTTGCGTC
TCTTCCTTTAATACTCGTCTCATCTTCCCTGCAATCAGTGTAAACACAACCATCTCTGTTCTCCTATTAACTTCATATAGCTTTGTGTGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	LC	Leaf Mature leaves	5712	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	4
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOS	suspension cultures	8026	2

mRNA member sequences (26)

Alignment image suppressed for unigene with 26 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101367	Kinesin motor region - Molecular Function: microtubule motor activity (GO:0003777) - Molecular Function: ATP binding (GO:0005524) - Cellular Component: microtubule associated complex (GO:0005875) - Biological Process: microtubule-based movement (GO:0007018)	846
2	118953	Region of unknown function XH	24
5	129373	Region of unknown function XH	23

Preceding Unigenes (1)

Unigene	Build
SGN-U215656	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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