Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U569983 in the current build, Tomato 200607 #2

Unigene SGN-U318306

Unigene Basic Information

Unigene ID:	SGN-U318306
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318306
mRNA sequence:	Length: 1438 bp

>SGN-U318306 Tomato 200607 #1 (7 members)
TTCAATGAGGCTCTTAATGGTATAGCTGATGAGGGCTGGTCAATGCTGGATAGTGATGGAATGGATGATGTTACCATCCTTGTGAACTCT
TCTCCTGACAAGTTGATGGGCTTAAACCTTCCTTTTGCGAATGGATTTTCACCTATGAGCAACGCGGTTATGTGTGCAAAAGCATCAATG
CTTCTACAGAATGTGCCTCCGGCTATTCTTCTCAGGTTCCTACGTGAACATCGATCTGAATGGGCAGACAACAATATAGATGCTTATGCT
GCTGCAGCCATTAAAGTTGGTCCCTGCAGCTTACCTGGGGCTCGAGTTGGTAACTTCGGGGGTCAAGTGATACTTCCACTCGCTCACACT
GTTGAGCATGAAGAGTTGCTGGAGGTCATTAAGTTGGAAGGTCATTCTCCTGAGGACGCGATAATGCCACGAGATATGTTTCTATTGCAA
CTATGCAGTGGAATGGATGAAAATGCTGTTGGAACTTGTGCCGAACTCGTGTTTGCTCCTATTGATGCCTCTTTTGCTGATGATGCACCA
TTGCTTCCGTCTGGGTTTCGCATTATTTCACTCGAGTCTGGAAAGGAAGCGTCCAGTCCAAATCGTACCCTTGATCTTACTTCTGCTCTT
GAGACTGGCCCAGCGGAAAACAAAGCAGCCAATGATCTTCACACTAGTGGTGGCTCATCAAGATCTGTCATGACAATTGCTTTTCAATTT
GCTTTTGAAAGCCACATGCAAGAGAGTGTTGCTTCAATGGCTCGACAGTATGTCCGAAGCATTATTTCATCTGTTCAAAGAGTTGCATTA
GCACTTTCACCATCTCATTTGGGTTCTCATGGAGGTCTTCGTTTGCCATTGGGGACTCCTGAAGCACATACATTAGCTCGTTGGATCTGC
CAAAGTTACAGGTGCTTTTTGGGCGTGGAGCTTCTCAAATTGAATACTGATCAAGGAAGTGAATCAATCCTCAAAAGCCTATGGCATCAC
TCAGATGCTATTATCTGCTGCTCCGCTAAGGCTTTGCCAGTTTTCACATTTGCAAATCAGGCTGGTCTTGACATGCTCGAGACAACCTTG
GTTGCACTTCAAGATATTACCTTGGAGAAAATATTTGATGATCATGGAAAGAAGAACCTCTGCACTGAGTTCCCCCAGATAATGCAACAG
GGTTTTGCATGTCTACAAGGGGGAATTTGCTTGTCAAGCATGAGCAGACCTATATCTTATGAGAGAGCAGTAGCATGGAAAGTTATGAAT
GAAGAAGATACTGCTCATTGCATCTGTTTCATGTTTGTCAACTGGTCATTTGTTTAAGTTACTGTTCTTTAGATCTGTTTTAAAGGGATC
AGTACACTAATACCTAAGAACCCTTAAATATTTTCCTTTCAGAATCAACATTTTGAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101432	Homeodomain-related - Molecular Function: DNA binding (GO:0003677) - Biological Process: regulation of transcription (GO:0045449) Homeobox - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) Homeodomain-like	183
2	118831	Homeobox - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) Lipid-binding START Homeodomain-related - Molecular Function: DNA binding (GO:0003677) - Biological Process: regulation of transcription (GO:0045449) Homeodomain-like	28
5	129305	Homeobox - Molecular Function: transcription factor activity (GO:0003700) - Cellular Component: nucleus (GO:0005634) - Biological Process: regulation of transcription DNA-dependent (GO:0006355) - Molecular Function: sequence-specific DNA binding (GO:0043565) Lipid-binding START Homeodomain-related - Molecular Function: DNA binding (GO:0003677) - Biological Process: regulation of transcription (GO:0045449) Homeodomain-like	26

Preceding Unigenes (1)

Unigene	Build
SGN-U216844	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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