Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U569057 in the current build, Tomato 200607 #2

Unigene SGN-U318674

Unigene Basic Information

Unigene ID:	SGN-U318674
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318674
mRNA sequence:	Length: 1987 bp

>SGN-U318674 Tomato 200607 #1 (16 members)
TTGAGATAACTTAAGGCAGTTATCCAATTGAGATGAACAAAGAGCATCAGTGATAATATATCTCTGTATTGTTTTTGAATAATATCTGGC
TATGGAAAGTAAGAATATTGGAGAAGGAAAGGTAGTATGTGTAACAGGGGCATCTGGTTACATAGCTTCATGGCTGGTCAAGTTGTTGCT
ACAACGTGGATATACTGTCAACGCCACTGTTCGGAATCTCAAGGATACAAGTAAAGTGGATCACTTGCTAGGCCTTGATGGAGCGAATGA
GAGGCTGCATCTATTCGAAGCAGAGTTACTTGAAGAGCAATCGTTTGATCCTGCTGTTGATGGTTGTGAAGGTGTCTTTCATACAGCTTC
ACCTGTTTTTCTCACAGGGAAATCTAAGGAGGAACTTGTGGATCCTGCTGTGAAAGGAACGTTAAATGTCCTTCGTTCATGTGCCAAATC
ACCATCTGTCAGAAGAGTTGTGATAACTTCTTCTACTGCTTCTGTTATATGCAATAAAAATATGTCAACCCCTGGTGCTGTGGCTGATGA
GACTTGGTATTCAGATCCTGAATTCTGCGAGGAAAGAAAGGAGTGGTATCAACTCTCCAAAACGCTGGCTGAGCAGGCTGCTTGGAAATT
TGCAAAAGAGAATGGGGTTGACTTGGTAACGCTCCATCCAGGTTTAGTCATTGGTCCACTTCTGCAGCCTACGCTCAATTTCTCTTGTGA
GGCTATAGTGGACGTCATAAAAGAAGGAAAAGAGGCATGGTCTGGTGGAATATATAGATTTGTTGATGTTAGGGATGTTGCTAATGCACA
TATTCTAGCCTTTGAGGTTCTTTCAGCAAATGGAAGATATTGTTTAGTTGGGGCAAACGGATACTCTTCTTTGGTTTTGAAGATTGTTCA
AAAGCTTTACCCTTCCATCACTCTCCCTAAGAATTTCAAAGATGGATTGCCTCTTACCCCACACTTCCAAGTATCGAGTGAAAAAGCAAA
AAGATTAGGAGTCAAATTCACATGTCTTGAGTTGAGCGTGAAGGATACTATTGAAAGCTTGAAGGAAAAGAACTTCCTCCACATTTAAAC
AATATTAAGTTGGTGGAAACGGAATACACTAGGCCTGAGCTACACAGTTGTGCCTGCGTGCCCACACCCTGGATTTTTGGGCGAAAAATC
CACTTTATATGCATAACTAATTTATACATTGATAATGTAATCTTTTTTTTCTAAATAAGTAACAAACACTGAATACATAGATAATGTAAT
TCATTACAGGTTGATTTTGTACAAGTAAAAGTTACCTATTTTCAGGTCTTGATTGACCTTTTATTTTCCAACTATATATTTTGCTTAGGG
TTCAGCCCTTGTTTTGTGTGTGACAAGGTAATAGTTAACTGTTAATTGTTCTTGTGATCAAATAGATGTGTCACATCACTTTGTCTATAA
CCAAATGGTGATGTCTAAGTTGAAGCAGCATTTCATCTTCATTCTTGAACTCGGGAAGACCTTGTTGTGATTTATGAAATCCTCTCTACA
CTGCCACATTTGTGGGCAGAAGAATGTAATTGATATAATTGATAAAAAATAGGAACAAAATCAATTATAAAATTACAGAATGAACTAAGC
AAACGTGAAATAATACAGTAGTAGCAGTTGAGACGGAATCTATGTAACGTTGTGAGTTGGGCTCGTCTTGTCAACATATTTTAGTTGATA
AGAGATGTCAGAAATATTTAGTAAATAAAAGAGAGATTTATATTCACGTGCGAACGCACATATCTCCAAACTAGTATATAGTCCTAAATA
AGAGAGGTTTATATCAGTAAATTATTATTTGCTCCATGAGTGGCCATAGGGAAGAGTATCAACCAACATGGGCCATGGCCACCACCCTTT
GCTATGGTCTTCTATTTTATGCCTTCCCACCACCCCAGGTGTTGTCGCACAAAAAGAGAAAAGAGAACTGAAGTGTCTTATGGTTCTGTA
TTGTTTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
adh	alcohol dehydrogenase

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	5
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (3)

Annotations (manual: 2 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101435	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	166
2	118460	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	116
5	129000	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	71

Preceding Unigenes (1)

Unigene	Build
SGN-U216719	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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