Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U584622 in the current build, Tomato 200607 #2

Unigene SGN-U322542

Unigene Basic Information

Unigene ID:	SGN-U322542
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	322542
mRNA sequence:	Length: 1270 bp

>SGN-U322542 Tomato 200607 #1 (6 members)
GGGAGGAGGGTTGGAGACTGAGAAGGAGGAGGTGGTGGTGGGTGGAGTGATAGAGAAGGCAGAGAAATCATCTAAGGTGTTGTGTTCTAG
TGGTATTAGTGGCAAGAATGCTATTGTTGTTTTGGATGTAAGGAGGGTGATGGTTGGAGTTGGGGCTCGGGCCTTGTTTTACCCGACACT
TCTCTACAATGTTGTTAGGAACAAGATTCAGTTAGAGTTTCGCTGGTGGGACTGGATTGATGAGTTTGTGTTATTAGGTGCTGTCCCTTT
CCAATCTGATGTGAAAAGGCTAAAGGAGCTTGGTGTCTCCGGTGTTGTCACCCTAAATGAGCCATATGAGACTTTAGTTCCGACATCTTT
ATATGAGGCTCATGGTATTCGTCATTTGGTTCTCCCAACAAGAGATTACTTATTTGCCCCATCTCTGAATAATATATGTCAAGCAGTAGA
GTTCATCCACGAAAATGCTTCCAATGGACAAAGTACATATGTGCACTGCAAGGCTGGTCGAGGACGTAGCACGACCATTGTCTTGTGCTA
CTTGGTTAAGTACAAGCAGATGACACCAAATGATGCATATAACTATGTGAAGTCAATTCGTCCAAGGGTGCTTTTGGCCTCTACACAACG
ACAGGCTGTCCAGGATTTTTACCATCTCATGGTGAAAAAGTCATACAGTTCTACCCCCTTGACTAGTTTGATCCCACGGAGCTCAATCTT
CTCCAGACGGAATTTGCTAGCCTTCGATGATGGTGCTGTAGTTGTGATAACCGAAACAGATCTAGATGGATATAATTCAAGCCTCGACTC
TAGGGTGGCTGGATCTGAGCTCTGGGCTGATTTGAATTTGATTTACAGGGTTCGAGTTGCTGGTGGGGCAGCCTTAGCAAGACTCTCCTG
TATGTGGTTACATTGTCACACCGACCAGAAGATTCCGAATCAGAAGCTGACTCCAGAGAGCAAGCAGCTGGAAAGTTTCACTGTAGATAT
ACATGTGTTTTCTTAAGTTAATAAGTTGTACATATATTTCCTCTGTATATGTAAAGATGCTATAAGCTAAGGTGTCTACTTTTTCAGCTT
TCTCTACCAAAAAACCTCGACGACGTTCGTCGTTCTCTATGTAAATACGAAATATGCCATATACTTCTCAAAGTTGCAAATGAGAAGTTT
GAGTATATGTCTGTTAATTCACTCAGCTAGAACCCAAAATGTGAAACAACTCAATAATCAATTATTTAGTAGTAGTTCTTTTTAAAAAAA
AAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101738	Dual specificity protein phosphatase - Biological Process: protein amino acid dephosphorylation (GO:0006470) - Molecular Function: protein tyrosine/serine/threonine phosphatase activity (GO:0008138)	42
2	119998	Dual specificity protein phosphatase - Biological Process: protein amino acid dephosphorylation (GO:0006470) - Molecular Function: protein tyrosine/serine/threonine phosphatase activity (GO:0008138) Tyrosine specific protein phosphatase and dual specificity protein phosphatase - Molecular Function: phosphoprotein phosphatase activity (GO:0004721) - Biological Process: protein amino acid dephosphorylation (GO:0006470)	11
5	130688	Dual specificity protein phosphatase - Biological Process: protein amino acid dephosphorylation (GO:0006470) - Molecular Function: protein tyrosine/serine/threonine phosphatase activity (GO:0008138) Tyrosine specific protein phosphatase and dual specificity protein phosphatase - Molecular Function: phosphoprotein phosphatase activity (GO:0004721) - Biological Process: protein amino acid dephosphorylation (GO:0006470)	9

Preceding Unigenes (1)

Unigene	Build
SGN-U224633	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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