Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U584214 and SGN-U584215 in the current build, Tomato 200607 #2

Unigene SGN-U324018

Unigene Basic Information

Unigene ID:	SGN-U324018
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	324018
mRNA sequence:	Length: 1570 bp

>SGN-U324018 Tomato 200607 #1 (6 members)
CCATAACCTCCATAACCTCAAACTTTATAACCATTATTCTCATAACCTCCCACTTTCTTAACCCCCATTATATTCATGCTAATATCATGT
ATATAACTTATGCCTCTATGTTACGCTATAAATAGACACATAAAAATTCATATTGTATGCACTTGAAAACTTGAAATAATAAGAAAAATT
CTCATCTTTTGTCTCCCTATTTCTATTGATTTGGTCTTCTATATTTCTTGTCCTGTTTTGCAATATATTTTAATGTTATTTCTCATTTTC
CCAACAATTATCAGGATAGATAATTTTGGGGGCAAATATGAGCCTGATTGGGATTAAATTATGCAAAAAAGAGTAAAATATAGGGAAGAG
AGCGTGAATTTCAAGAGAAAACGTTGAGCATGATATGGATAGTTCCCAAGGACAAAACTTTGATCTTTTATCCAATTCCTTTTGTATCTG
TTTTGTGGTTTTCAAGTCAACTTTCAGCCCAGTGTTTACTTTTGGGTGATCCGATATGGGGAGTAGAACTTGCGATCTTGTTGGCCAAGT
CAACCCAGCTCAGAGTTTCGATACACAAGCTCTGCTTCGCTATGCCTCTGCTAATGTTATTGGCTTCCCTGCAAATCCTTCTCTATTTAC
TATATCTCAGTTTGGGCATGGCCAGTCAAATCCCACTTTCCTCATTGAGGTTGGCTCAGGAACCTTGCCAAAAAAATATGTGTTGAGAAA
GAAACCCTGTGGAAATTTACTGACATCTGCTCATGCTGTTGAGAGAGAGTATGAGGTTCTACATGCATTAAGTACTCACTCGGTGGTCCC
GGTCCCAAAGGTTTTTTCTTTGTGTACAGATTCAAGTGTGATTGGAACTCCATTTTACATTATGGAGTATCTGGAAGGACGTATCTTCGT
AGACCCGACGCTACCTGTGCGGATTCTGTTTTCAAATTTTTATCTTCCTAGATTTTTTAGATTGTGAATAATATTAGTGTGGTTGGTAAG
GCTAATTCTTTTCATTGATTTAAAAGACAATGTAACTTTTTTTGCCTCTTTAGGATGTACTCCCTGAAAGAAGAAGGGTCATATTTCGTG
CTGTTGCTCAAGCTTTGGCCGGTCTTCACTCTGCTGATGTTGATTTAGTTGGTCTTGGTAACTATGGGAAACGGATGAACTATTGTAAAC
GGCAGGTGCAGAAAATTTCATTTGTGGAAAGCTTAAATAAACTTCAATACGAAATAGTTTGGTTCAATAACATGAACCCTTACATATTTC
TCTCTATTCAAGCTCATTTTCAGTCTCTACATTTCTGGGGAAATTAAGTAGTGCCTGATTGTTTTTTTTGTTAGTCTACATTTCTTGACC
CTTGAGATTTATTATGTTACTGAAAATACGTGTGCTTTTGGGTTTTTACCCTAACATGGTTAGTTACTTTGTTCATGCAATGCACCTTTT
AGGGGTGATTTTCGGTGTTTAATTTTTGAATATTCTTATAAAGTTTGATAGTTTATGTAACCTAATTCAGGTGGAAAGGTGGGCCAAACA
ATATCTTTTATCTACTGGTGAGGGTAAGTCCCGGAGAAAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (2)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101614	Acyl-CoA dehydrogenase central region - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase type1/2 C-terminal - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase middle and N-terminal Acyl-CoA dehydrogenase C-terminal-like	58
2	119600	Protein kinase-like Acyl-CoA dehydrogenase C-terminal-like Acyl-CoA dehydrogenase middle and N-terminal Acyl-CoA dehydrogenase central region - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Acyl-CoA dehydrogenase type1/2 C-terminal - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118) Aminoglycoside phosphotransferase Acyl-CoA dehydrogenase type 1 - Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995) - Biological Process: electron transport (GO:0006118)	14

Preceding Unigenes (1)

Unigene	Build
SGN-U223845	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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