Clone Read LE_HBa0128J14_SP6_69194

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0128J14_SP6_69194
Primer
SP6
ID from Seq. Facility
LE_HBa_128_J14-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1721 raw
Sequence
>LE_HBa0128J14_SP6_69194 (raw untrimmed)
GCGCGAGCGCGGCTGATTCTTACAGAGCGAGAGTAGGGACGCTTGTGTGCTGAGCGTGTGTGGTGCACTAGACGCTAGTATTATACGAGAGTCTTGGCTA
CTAGTAGTACGTGGTNGAGCGAGCGTAGTGCTATCGGGCTGNCTACAGTCGAGTATGAGAATGTAACTGATNTGACGCTCCGCGTGATAGGTAGATAGTA
GGATAGNGNTAGCGTGNCGATTGTGAGTGATGAGTATGCGTCTCTCGTGTCTAGGCTTGTAGAGTGATCACGCACGCTCTNATGACAGTATATAGACACA
CCTGTGAGANACTGATGCTCTGNCGTACGTGTTTGTTATTGTNTGCACTAGCTAGTGCGNTTGTGANAGCAGCGGTNCATGGCGATNGACACAAGCGANA
AGCCACAGAAATGCTAGAAGANATCGATATGCAGCGGCGCACGCACTGCGACAAGCGTCTGACTACTGTNTAGCCATATGGATACGTATGATNGTATTGT
ACGTCATGCTTGTATNCTNCNCTCGCTACTGGGTGGTGTCTGTGCGACGACTACCTACTCAGCNGCTATTGGGTGGTAACGACTNATTGACGATTGAANG
TGAAANTGATCATAANGTATTGCGCGAGTTCGCCTTCACTTATCTTATCTTTCGCTGTAGCNCTAGGTGCGATCGGTTATAAGCCTGAGTACGTGGTGAC
AGGTGCANCTGCGTCATAACAGTACTATGTCATGCTACGTACCCGACGCTATACCACGTGCATAGCTTGAAGATGGGNTNGCGAGTGAGCATGGTGTGGT
CTAGCTCTCCAGAGTCGGACTGCTCTCGATNACCTACCTATTTGGTGCANCACTGACACTCCGCATCGCTTGTTCTATATGACATGCGCTCTGCTGGACT
TGTGTGTTGCNGGCCGATTGCAGCTGTTGCGCGATCTATGCCGGCTGAACANTGTAGTGATGGCGGGTGATCGGTACGTGTGCGTACGCTTGCTCGTNGC
GTCGTCTACCCTATGTGATNCTGTGTATCATGTATTTGCACTACTATTATATCTACTGTCGACTAACGATCTCTGCTTTATTGCTTTATGTTGCTTTGTG
CTGTTCCTTTAAGCTNCACCGTGTTATTATATAGTACGTCGTCTGACTTCAGTTTAATAGACACTATGGTATGCCGGATCTATGATTATACTATGATACA
TGTTATACGATGACATGATATATATAGCTGATACATCTGAACAGTGNACGAATTGTCGCAGCCGATCACGGGCAGGTANGTTATGCTATCGGGTGATCTC
GGTGTCGAGAGTGAGCTCACCGTNGATNCGACCGTGTGCGTGTGCTGTTGCNCACATCATCGCGTGCACGGCTANGNGTAATCTGAATGATGTCCGACGT
TCTGCTCCANGTATTGTAACCTGGATTGCACACACGCTACCATCNTGCGTTGGCATCGCCCTACATGATAGTGGAGTGATAATCACTGGCGTGGGTATTG
TGTGATAGAAGCGCTGTTGACGCGTNATATCAACGCACCAACAGGATGAAGCGAGGGTGTGCATACTTCATGTTATGAGTTGTATGTCGTGAGATATTAC
ATCGACCACACGACGGNGTACACACTATACTGCAATTGTGTCTTCGTCGCAACTACATGCTAGTCCTTGTCGACTCCCTGCTCCTTTGCGAACCATCTAG
GCGCCTTCGTCACGGCTGGTT
>LE_HBa0128J14_SP6_69194 (trimmed for quality and cloning vector)
G

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0128J14
Clone
Clone name
hba-128j14
LE_HBa0128J14
C02HBa0128J14
P128J14
Clone type
BAC
Contamination
none
Estimated length
26,829
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found