SGN Gene Family 101719
| Summary |
| Family Number | 360 |
|---|---|
| Total Genes | 43 |
| Build Date | 2007-08-28 |
| i Value | 1.1 (Low stringency in grouping genes together) |
| Build | 4 [Details of the Overall Family Build] |
| Annotation | Sec23/Sec24 beta-sandwich; Sec23/Sec24 trunk region;Molecular Function: protein binding (GO:0005515), Biological Process: intracellular protein transport (GO:0006886), Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888), Cellular Component: COPII vesicle coat (GO:0030127); Zinc finger, Sec23/Sec24-type;Molecular Function: protein binding (GO:0005515), Biological Process: intracellular protein transport (GO:0006886), Biological Process: ER to Golgi vesicle-mediated transport (GO:0006888), Molecular Function: zinc ion binding (GO:0008270), Cellular Component: COPII vesicle coat (GO:0030127) |
| Data Set | Gene family for all current cgn unigene builds and the Arabidopsis proteome version 2004 |
| Explanation of family analysis and terms used on this page | |
| Relations to Other Builds |
| Build id | i Value | Family Number (Size) |
|---|---|---|
| 5 | 2 | 1195(14) 812(18) 3222(6) 3387(6) |
| 6 | 5 | 8835(2) 5240(4) 639(18) 3043(6) 2922(6) 3815(5) 8273(2) |
| Family Sequence Alignment |
| Alignment not available for this family. |
 Family Members
|
Family Members| Organism | # of Members | Member Id |
|---|---|---|
| Arabidopsis | 9 | At1G05520 At2G21630 At2G27460 At3G07100 At3G23660 At4G01810 At4G14160 At4G32640 At5G43670 |
| Solanum tuberosum | 15 | SGN-U274479 SGN-U279197 SGN-U279533 SGN-U279555 SGN-U282265 SGN-U283512 SGN-U285190 SGN-U285634 SGN-U289103 SGN-U291082 SGN-U291338 SGN-U294800 SGN-U296353 SGN-U296465 SGN-U297808 |
| Capsicum annuum | 6 | SGN-U197963 SGN-U199752 SGN-U200412 SGN-U200772 SGN-U202278 SGN-U203996 |
| Petunia hybrida | 1 | SGN-U208340 |
| Tomato 200607 | 12 | SGN-U318911 SGN-U319084 SGN-U319085 SGN-U320617 SGN-U320994 SGN-U325460 SGN-U326644 SGN-U326658 SGN-U332709 SGN-U344481 SGN-U344776 SGN-U345535 |
Working
