Sol Genomics Network

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Unigene SGN-U579485

Unigene Basic Information

Unigene ID:	SGN-U579485
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1199 bp

>SGN-U579485 Tomato 200607 #2 (53 members)
ATCATTAATATAGTTCTTGTAAACTTGATTGAAATTCGAATTAATCATACACGGAATAAAAAGATGGAAAACAAGGGAAAATGAATACAA
TTTCTCAAGGGAAAACCCAAAGGAGAATTCAAACAAACTGTCCCTATAAACATAGGGCAATTAGTTTTTCTAGAACTTAGTATCCTTCGG
GCTTGTAAGCGATGAAACTGATGCACTGCACTTGACGAACATTGTCGAATCCGATGATACGGACCCATGCCTGTGGGTAAGCCTTCTTTG
CCTCCTGCACCTCAGCCAAGACCTGGGTTGCATCAGTGCACCCGAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAGTATC
CTGGTGACTTATGGTTCTCACGGTACACAAATCCGTGCTCAGTCTCGAATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAA
TTTCGCAGAGAAGCAGAGGAGGAAGCGACAGAGGAAGCAGCAAAATATGAAGTACAATCCAAGAGTATCCTCCTCTCGCCGGAAGAGCAG
GAAGGCTCATTTCACGGCGCCTTCAAGTGCGCGCCGGATTTTAATGAGCGCACCCTTATCGTCCGAGTTACGTGTAAAGTACAACGTAAG
ATCTATGCCGGTGAGGAAAGATGACGAAGTTCAGGTTGTTCGTGGAACTTACAAGGGCCGTGACGGGAAAGTTGTCCAAGTGTACCGTAA
GAAATGGGTGATCCACATTGAACGTATAACCAGAGAGAAGGTCAATGGATCTACTGTGAACGTTGGTATTCATCCTTCGAAGGTTGTTGT
TACAAAGCTAAGGCTTGACAAAGACAGGAGATCACTACTCGACCGCAAGGCTAAGGGACGAGCTGCTGCTGACAAGGACAAGGGCACTAA
GTTCACTTCTGAGGATATCATGCAGAAAATCGATTGATTTTTCACTCATTTTGTCTGGTATTGCTATTTTAGCTAAAGAGAATTTATATC
AGTCCGTTTCAGTTCATTAGTGACATTTAATTTTGTTGAAGTTTCTGTTTTTGCTTAAATCAATGATGATGATACTTCAGAACTCCATAA
CATAGTTAGATTATTATGTTAGCTACTATATTCGACTGTTGGCTGTACCTGTAATTCTGCTCAAACACTCATGAATGATGCTGTTTAGCC
GAGTGACTCGCGCTGGTGCTTAGTATGTA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	5
Solanum lycopersicum	LB	Leaf Mature leaves	3316	3
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	4
Solanum lycopersicum	LeMiToLf01	leaf	30679	5
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	Sl_RootInf01	root and collar Three weeks old	385	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	16
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	4
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2

mRNA member sequences (53)

Alignment image suppressed for unigene with 53 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (16)

Annotations (manual: 4 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U314483	Tomato 200607 #1
SGN-U338735	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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