Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U571148 and SGN-U571149 in the current build, Tomato 200607 #2

Unigene SGN-U214025

Unigene Basic Information

Unigene ID:	SGN-U214025
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	214025
mRNA sequence:	Length: 1370 bp

>SGN-U214025 Lycopersicon Combined #3 (47 members)
CGCAAGTGTAATTTGTCAGAGTAGATGGAGATCTGTATTATTATCTATTCAGGGAAGTATGAGATTGATTAAAACAGCAACGTGCTGAAG
AGTCTTCCATTGGACCTGCATCACAGCATCAGTAGCCTTCCCAAGACAAAAGATGAAGACGGTTGCGGTGGCGTTGTTGGTTGCTGTAAT
TGTGGTTGTTGAAGTTCCATTCGGATACACATTTCCATCTGCAGTTCCTTCCTTTCTTTGGTCACCGCATCATTATGGAGTTGCCTCAAG
TGAAGCTGTCAATTACAGAACCCTTTCACTGAAGGATTTAGTTAAGTCCGTTATGGCTGAGGGTGGTTGGTCGGACTTGCTGTGCTCAGG
AAAAGAAGGTGGACAGCATCTGGATCTTGCACTTGTTTTTGTTGGGAAAGAGTTGCAATCTGTGGATATTTCTAGACCCAAAAATGCCAA
TTCGGAGCTTGTGGACTTGCTGAAGGCCTCTGTTGCAAAGTCCAATTTTTCCCTGGCATTCCCCTACATTGATGCATCAGAGGAGAGAGA
ATCAGTGGAAAGCTCCTTGATTTCAGAATTTACAAACACGTGTGGGCATGGTCTTGAGGCCAGCAACATTGCTTTCTCGCAATCATGCTC
TGTAGAGGGTGGAAGTTTTGAGAAGCTCACTGATGTCCACTCAGTTCAGAACTATCTGCTATCAAGGATCACTAAACAATCCAAGGGGCA
GCCAACTTTGATTGTTCTCTGCGATCAAGATCATCGAACCCTGGGAAGAGCTGAAGAAAAAACCTCTGAAGGACAAGTTTTATCTCAACT
TCTCAGTTATGTGGAGAATCTGGGAGCAAAATACACCGCACTCTATGTGTCAGATCCTTTTAGGTCAATTCAGTTCCCCTCTCATTGGGA
AGTAGAAAGGTTTCTTACTGAAGGTACTGGAAATAAATCAGTCGATGGCTGTGATGGAGTTTGCCGAATTAAATCCTCATTTTTGGAGGG
CATATTTGTGGCAATTGTCTTGCTTATAATTTTAATATCTGGCCTTTGCTGCATGATGGGAATTGATACTCCAACAAGGTTTGAGGCCCC
TACAGATTAGAGGTTGTGGAAGATAAATTCATATTCTGAGTTGCTTTGATTGCAGTAATGTGAATGTATCTTTATGGTATGCATAACCCT
GTAATTTTTGTTTATTTGTCACACAACACTTGCTTGTATCAGCAGTATAGAGTGTTACATTCCAATAATGTTATGGTCATTCTTGATTTT
TTTTGGTTAAAAAAAAATCTGCACGTACCAAGTTTCGGTTACGTGCCCTGGTTATTCTTCAGTTCTGATGGATATGGCTATTTTACTGTG
TTTAGTAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (21)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	2
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	4
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	3
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	6
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3

mRNA member sequences (47)

Alignment image suppressed for unigene with 47 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	# Members
1.2	2810	6
2	25447	6
5	59456	6

Preceding Unigenes (1)

Unigene	Build
SGN-U144478	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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