Sol Genomics Network

Unigene SGN-U272666

Unigene Basic Information

Unigene ID:	SGN-U272666
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272666
mRNA sequence:	Length: 1428 bp

>SGN-U272666 Solanum tuberosum #4 (10 members)
CAAAACTCCGCCGCCGCATACAACTCCTCTCCGCCATGGACACCGCCGGATTACCCGACCCGAATCCATCACAACCCGACACCACCACCG
CTGCCGCCGCGGACACCACCACTGCCATTGACGATCCACTAAACAACCCATACACCTCCCTAAACGCCATCTGCCATGAACTCTCCGATC
TCCAAGACCTAGCTACTCGCGGCGCGTGGAAGTCAATCCTCGACAAAGTCGGCCACGCGCGGTCCCTCAACCTCCTCACTAAACCTCACG
AACACCTCACGTACCTCACTTTCAACGTCTTAGCACTCACCAAGCTCCGCCGTCCCGTCGATGCTAATCAAGAGCTCGAAACCCTCCTCG
ACGGCGAAGATTTCAACACCCCACAATTCCATTACCAGAATTACCCTAATCATTACCCCAATATGAAGGGCAATTTCGTCCCTTTTGCTC
TCCGTTGGCTCCATGCTTATCTTCCTTACTCTCTTGCTCAGCGGATGAAATCACTCGACAGGTTATATACGCTTATTGATTTTATTAGAT
CGAAAAAGTTGAAAGTTTCAACTAACCCCAGTAAAGATTTGTGGAAAAGAAGGGAGATTTTGGTTTTGAATACGATAATTAGTCATCATT
TGAGTCAAAAAGATTTCAAATTGTGTTTGGGTTTGTTGAATGAGCTGATTGGAATATGTGGGGATGATGATCCGAACGTGTTGTCGAAAT
TAGGATATGTGAAAATGCAGTATGGAGATGTGGAGGGTGCGAAAAAGGCGTTTAGCGCGGTGGAGGGAATGATAGGGAGTGAAAGTGAAG
TGGGGTTGAGGAATTTGGTTAGTAGGAGTAAGGCATTGATGTATATAGTGGAGAAGGATTATGTCTCTGCGGTAAGGGAGTACGAAGAGT
GTATCGAGAGGGATGGAATGGATATGGTGGCTATGAATAATAAAGCTTTGTGTTTGATGTATTCAAGGGATTTATCGGATGCTATTAAGG
TGTTGGAGAATGCTTTGGAGAGGGTTCCGACTGTCGCGTTGAATGAGAGTCTTGTTGTGAATTTGTGTAGTATGTATGAATTGGCTTATG
TTAATCATGCTGATATTAAGAAGACACTTAACAATTGGATTGCTAGAGTTGCTCCTGATGATTTTGACTCGTCTTGTACTCGAACATGAG
GTATTGTTCTTTGTAGATGTAACTGAGAATGAGAATTCAAATAAACATTTTCGTAATCTCATTTCCTCTTTCTAATTTGTGTGATTGTTT
GTATCTTGGGACACATTTTTGTTCTTTGATAATATAGAAAGAAGGACCTTATATATCACTATATTTGGGGTGACATGATTTGTAATTTGT
TCGTAGTGTTAGTTAAGTAAGAATTAACTGCTTGTATTCCGTCCAAAAATGATGTTGTAATGAAGTTATTCTCAAGAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	STM	mixed tissues	14805	4
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	4671	TPR DUF232	3
2	28709	TPR DUF232	3
5	63233	TPR DUF232	3
1.1	105032	Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488) Tetratricopeptide region Protein prenyltransferase	3
2	124939	Protein prenyltransferase Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488) Tetratricopeptide region	3
5	135287	Protein prenyltransferase Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488) Tetratricopeptide region	3

Preceding Unigenes (1)

Unigene	Build
SGN-U246659	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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