Sol Genomics Network

Unigene SGN-U564005

Unigene Basic Information

Unigene ID:	SGN-U564005
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1564 bp

>SGN-U564005 Tomato 200607 #2 (33 members)
GACACACAAAATTCTCTTTCATTTCTCTCTGATTCTAAGAAAATTTCTCCCAAATTTCAACAAAATGCGTGAGATTCTTCATATTCAAGG
TGGACAATGCGGCAACCAAATCGGTGCCAAGTTTTGGGAGGTTGTTTGTGCTGAGCACGGCATTGATTCCACCGGAAGATATGACGGGGA
TGCTGATCTTCAGCTTGAGAGAATCAATGTCTATTATAATGAAGCTTCTTGTGGTAGGTTTGTTCCGAGGGCGGTTCTTATGGATCTGGA
GCCTGGTACCATGGATAGTATTAGATCTGGTCCTTATGGACAGATCTTCCGTCCTGATAACTTTGTGTTTGGACAATCTGGTGCGGGTAA
TAATTGGGCGAAAGGGCATTATACTGAAGGCGCTGAATTGATTGATGCTGTTCTTGATGTTGTTCGTAAGGAAGCTGAAAACTGTGATTG
CCTTCAAGGGTTTCAAGTTTGCCATTCATTGGGTGGAGGAACAGGATCTGGTATGGGTACCCTTTTGATTTCTAAGATCAGAGAGGAGTA
CCCAGACAGAATGATGCTTACGTTTTCGGTTTTCCCTTCACCTAAGGTTTCCGATACCGTCGTTGAACCTTACAATGCTACTCTGTCTGT
TCATCAATTGGTTGAAAATGCTGATGAATGTATGGTTCTTGACAATGAGGCTTTATATGATATTTGCTTCAGAACCTTGAAGCTTACCAC
CCCAAGCTTTGGAGATTTGAATCATTTGATATCAGCAACAATGTCTGGTGTTACCTGTTGTTTGCGTTTCCCTGGTCAGTTGAACTCTGA
TCTCCGTAAGCTGGCTGTGAATCTGATTCCATTCCCAAGGCTCCATTTCTTTATGGTTGGGTTTGCACCTTTGACTTCCCGTGGTTCACA
GCAATACAGAGCTTTGACTGTCCCCGAGCTTACCCAGCAAATGTGGGATGCCAAGAACATGATGTGTGCAGCTGACCCTCGCCACGGCAG
ATACTTGACTGCCTCAGCTATGTTCAGGGGCAAAATGAGCACGAAAGAGGTCGATGAGCAAATGCTCAACGTGCAGAACAAGAACTCATC
CTACTTTGTTGAGTGGATCCCTAACAATGTGAAATCAACTGTTTGTGATATCCCACCTACCGGACTTAAGATGGCATCGACCTTCATTGG
TAACTCAACATCAATTCAGGAGATGTTTAGGCGCGTGAGCGAACAGTTCACTGCTATGTTCAGGAGAAAGGCTTTCTTGCATTGGTACAC
TGGTGAAGGAATGGACGAGATGGAGTTTACCGAGGCTGAAAGCAACATGAACGATCTTGTGTCGGAGTATCAGCAGTACCAAGATGCCAC
TGCTGATGAAGAGGGGGAGTACTATGAGGATGAAGATGAAGCTCAAGAGGAGTAAATTGAAATGTAATTTGTACTTTTGTTATGGATGAT
GCCAAACCACAACTTCCAGTTGATGTTCTTTTTGGCTATGAGATGTAATAGTTCAAAACTTTGAAGCTTTAATTATCTTGTATTAGTTCA
ATTTGCTATGGAAGACTATTTTCAATGTTGTGAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	5
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	2
Solanum lycopersicum	LeWCAD	Seedling Two-week-old seedings	227	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	4
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	8
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (33)

Alignment image suppressed for unigene with 33 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 0 | blast: 3 | go: 7 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312315	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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