Sol Genomics Network

Unigene SGN-U566225

Unigene Basic Information

Unigene ID:	SGN-U566225
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1357 bp

>SGN-U566225 Tomato 200607 #2 (50 members)
AGCTGAATTTGTGAAGAAAAATTGAGAAAAATCAAATTTTGAGCAAATCCCAGATAAGAAGATTTGAAAAAAGATGGTGGGTACAAATTT
GAAAGCAGAAACTATGAAGTTAATGGATGAAAGAACTAATACTGAAGCTGAGATGGATGTTGTTATTCAGCGACTTTGCCAACCTGGTGG
TCCTGGACTTTCAGGGAACCTAGTTGATTCTGAGGGGTTCCCAAGAACTGATATTGATATTCCCTCTGTGCGTGCTGACCGGCGTAGGCG
ATAGCAGGTGCAGGAGATCAACTCCTAATAGAAATTCTCAATTAAGCCAAAAAATAATTGCCTACAAGAAAGGGGGAGATCTGCTGTTGT
TGCTTGAAGAAAGAACCCTTGTACTACTTTCTCTATTTGTCATTTACTCTCTAAATTTTTTTCCAGCATGGATGTCAAGGTCTGCCTGTT
TCTTGTCCTACTCGGTGCTGTGTATTGTACAGCTAGAGAATTAGCAGCCCCTGACCTCCTTATTATAGAGACCGAGGATGTTTCAGCATT
GTGGACAAGTAACCTACAGGCACAGAAACAACTTCAGCCTCTGAAAGATGTCAGCAACATTAAAGGATTATGCACATTGTGTGAAGAATA
TACTGCTACTGCGCTTGATTACCTTTCTAATAAGCAGACCCAGGCAAAAATACTTGAAGTACTTCTCATGACCTGTTCGAAGATGCCAAT
ATACAAGGAGGAGTGCACTGCCATGGTGGATCAATATGCTCATCTCTTCTTCTCAGAGATCTCCACTATAAAACCTGACGACATATGCCA
AAAGGTTGACCTTTGTCGGAAAGTGGTTTCCATCTCTCAAAAGTTCTCCCCAAATGGCTGTGACTTGTGTCATCAAGTGGTTGAAGAGAC
AGTATCAAAGCTGAAAGATCCTGACACTCAGTTGGACATACTTGCAATTCTCTTGAAGGCATGTGGATCTGCTGAAAAATATTCCAATAA
GTGCAAGAAAATGGTCTTTGAATATGCACCAGTGATCCTCATTAACGCGGAACATTTTCTGGAGAAAAATGATGTATGCACTATTATGCA
TGCCTGTCAGCCTGCTGTCGATAAAGAGGATGCGTTACCAGAGATGCAAACTTCATTGCATTCTGCTTCTTAAGTGAATACAGGTTACTA
CTGGTTCCAGCTTGGTATGCTTTTGTATGTAAACAATTGGATTACCATCTTTCAGTTTGTGCCTTGTGTTTGTGTATAATGTGTTTTATT
TGAACTGCAAACTTTATCACTTGTTTATATACAATGATATTCATGGAAGAAGCTCAACTTAATAAAACTTACGACTACGTTCTTAAAAAA
AAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (23)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	5
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	11
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	4
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (50)

Alignment image suppressed for unigene with 50 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U315587	Tomato 200607 #1
SGN-U315588	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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