Sol Genomics Network

Unigene SGN-U577550

Unigene Basic Information

Unigene ID:	SGN-U577550
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1488 bp

>SGN-U577550 Tomato 200607 #2 (32 members)
CCCTGGTCTTTTCTTTTCTTTTCTTTTCTTGTCTTGTGCGGCTGGCTGGGTAGGTGCTACCATTTTCAGTGTAAAAGGTTTGTTCCCCCT
GGAAGAAAAAAGAAAAGAAAAAAGGTAGAGATATGTCAGGTTTATATAATCCCAACTTTTCACCTGCCAGAGCTGCTTCTCCCCAGATTA
GAAGTACACCAGATGTTGACAGTAATCACTACTTGTCAGAGCTGTTGGCGGAACATCAAAAGCTTGGACCTTTTATGCAAGTTCTTCCTA
TATGTAGCAGACTCTTGAATCAAGAGATTTTAAGGGTTTCCGGAATGCTGCCGAACCAAGGATTTGGTGAACTAGACAGATTGCGACATA
GAAGTCCCAGTCCTATGGGTTCAGCAAACCTTATGTCAAATGTTACTGGAGCAGGATTGAGTGGTTGGAATGGACTTCCCCAGGAGAGGT
TGAGTGGACCTCCTGGAATGTCAATGGACTGGCAAGGGGCCCCAGCAAGTCCTAGTTCGTACACTGTGAAAAGAATATTGCGGTTAGAAA
TTCCAGTCGACACTTATCCAAATTTTAATTTTGTTGGGCGACTTCTTGGCCCCCGAGGGAATTCATTGAAACGGGTGGAAGCTACCACAG
GATGCCGTGTTTTTATTAGAGGAAAAGGCTCGATAAAAGATCCAGACAAGGAGGAGAAACTAAGGGGAAGACCAGGATATGAGCACCTGA
ATGAACCACTCCACATTTTAATTGAAGCTGATTTGCCAGCCAGCGTTGTGGATATTAGATTGAGACAGGCACAGGAAATCATAGAGGAGT
TGCTCAAGCCGGTGGATGAATCAGAGGACTATATAAAGAGACAGCAATTGCGTGAACTGGCGATGCTAAATTCAAATTTCAGGGAAGAGA
GCCCTGGACCAAGTGGCAGTGTCTCTCCTTTCAATACTAGTGGCATGAAACGTCCCAAGACTGGTCGTTGAGAGGAATGAGAAATTGAAG
TTGTTGATGCTAAGAGAGGTTTGCACTCCTCGGAGATAATGAAAGGCATGCCTGGGCATTCCTCTCAACATACATCATATCCGCATCACT
ACCTAATCCCAAGCTATAAATAGACACAGGTCCTTGCGGGTGATTTTTGGTTTGCTTTTGGGTTTTATTTATTTTTTCAACTACAGAAAT
GAAAAAGAGTAAAAAGGAAAATTAGAACTTCTGGTTTATACAGTTGGCTTTTTTATTTAGGTTTGGTCTTGTCAGTCCCTTGTAAACTTC
ATTGATTTATTCTTGTTTGGTAATTGTAGTGTGAAATATGCTGTTATTGGTACATGGCAGCATTAGCAGTTTGAAGCCAATAGGTCTTTC
CTTCATTATGTTGGAGTCGTACATTTGTGCAACTATTATCAAAGAGACACCAATATTGGTGCTTTGACTGGAGTTGGATTTATGTATGAA
TATACATATTAGTGCAACATGTAATATGTTGAAATGCCACTGTATTTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	6
Solanum lycopersicum	LeWpAFLP	whole plants, except for the roots	402	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	5
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	3

mRNA member sequences (32)

Alignment image suppressed for unigene with 32 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (6)

Annotations (manual: 1 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U316788	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: