Sol Genomics Network

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This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U578667, SGN-U591425, and SGN-U593003 in the current build, Tomato 200607 #2

Unigene SGN-U213716

Unigene Basic Information

Unigene ID:	SGN-U213716
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213716
mRNA sequence:	Length: 1392 bp

>SGN-U213716 Lycopersicon Combined #3 (43 members)
TTATCTTCACAATTCTTTAGTTTCAATAAAAACCTTATCTTCATCCCCTTCTTCTCCAATGGCTTCTTCATCTTCTTCCCTCCATTTCCT
TTCACTTACACCACAAACACTCCCAAAACCCACTTCCCAAACAACTTCAATTTCCTTCTTTTCACTTCCTTCTTCCTCTTTAAACCTTTC
TTTATCATCTTCTTCAACCCCAAGATACTTTGAGTCTTCTCGTTTTGTTCGTAAAGTAACCCTTTCTGATTTTGACCAAATTGAGGAAGT
TGGGGCTGGTGATGATGATGAGGAGGAGGAAGGGGGTTTGAGTGATGAAGGTGCTTCATATCAAGAACGTAATGCCAATCCTGACCTTAA
AATCTTTGTTGGTAATTTGCCTTTCAGTGTTGATAGTGCGTATCTTGCTGAGCTTTTTGAACGTGCTGGAGATGTTGAAATGGTTGAGGT
TATCTATGACAAGCTTACAGGAAGAAGCAGAGGTTTTGGCTTTGTGACAATGTCCTCCAAAGAGGCAGTTGAAGCTGCCTGTCAACAATT
TAATGGCTATGAAATTGACGGGAGGGCACTGAGGGTGAATTCTGGGCCAGCACCACCCAAAAGGGAGAATTCTTTCGGGGGCAATTCTTC
TTACCAGGGAGGCAGGGGTGGAGGGAGTATGGACAGCTCCAACAGAGTCTACGTAGGAAACCTTGCATGGAGTGTTGACCAACAACAACT
TGAGACCTTGTTCAGTGAGCAAGGAAAGGTCGTGGATGCCAAAGTAGTCTATGATAGAGATAGCGGTAGATCAAGGGGCTTTGGATTTGT
AACATACAGTTCCGCTCAGGAGGTCAACGATGCAATTGAAAGCCTGGATGGTGTTGATCTAGGTGGCCGGGCTATCCGCGTAAGTCCTGC
TGAAGCTCGTCCACCCAGACGTCAATTCTGAAGATTGTAGCCAACATCTTTTTGACCGAGAAAAGGCTTGAGGGTCCAGGAGATGACGAT
AATTGCAGAAATGAATGAGTTATTAACTTTGCAACAGCTATATCTTAAACTTGCGCGGACAAACTACTCTCTACTTCTGGACTAACTAGA
GCTCTCAAGTAAATTAGTTTTCGTAATGTATGTTCTGAAATTGCCTCAGGAAGATATCCCTGATCTTGTAATATGATTCTATCCATCACT
TGTTGACAATCAAGACAATGAAAAAGTTTGATACTCTTCGAAAAAAAAAAATAGCGCGAACCAATCCCTGTTCTACATATGAATTAGCTA
GAATTGTGTGTTTGTTTGTGCCTATGCCTCTACAATTGAAGTGATTTTTAGTAAAACTTACAGTAGTTGATTTTGTATTGAAATTCCAGT
GAAGATAAAGAACAGAACAATACTGAGTTAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	7
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	6
Solanum lycopersicum	cLER	leaf 4 weeks	5127	7
Solanum lycopersicum	cLES	leaf 4 weeks	5243	4
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	7
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3

mRNA member sequences (43)

Alignment image suppressed for unigene with 43 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 2 | blast: 2 | go: 1 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	3	RNA_rec_mot	1201
2	22060	RNA_rec_mot	87
5	56714	RNA_rec_mot ELAD_HUD_SF	25

Preceding Unigenes (3)

Unigene	Build
SGN-U144233	Lycopersicon Combined #2
SGN-U144234	Lycopersicon Combined #2
SGN-U161014	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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