Sol Genomics Network

Unigene SGN-U268767

Unigene Basic Information

Unigene ID:	SGN-U268767
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268767
mRNA sequence:	Length: 1896 bp

>SGN-U268767 Solanum tuberosum #4 (28 members)
GAAGGCTGAGGGTTAGCAGAGAAACATGGAATCTGGAAAGAGGAGTACTCTGGCTCTGCTACCACTCTTCCTTTCTTTCCTGTTTTACTT
TGATTTCTCAAAAAAGCTTCCCTCAAGCGACTGCAGCCTTCTGCCTCATAATCACTATTGGATATCCAGCAAACGTATTGTGACTCCAAA
TGGAACAATTTCTGGTGCAGTTGAGATAAAGGAAGGGAGAATTATATCTGTTGTTGCTGAAGAGAATTGGCATGTAAATTCTTCGTTTAC
CACAGTGGTCAATTATGGGGAGTCTGTTGTCATGCCTGGATTTATTGATGTGCATGCCCATCTTGATGATCCTGGAAGATCAGAATGGGA
AGGGTTTCCTTCAGGAACAAAAGCAGCTGCTGCAGGTGGAGTAACCACATTAGTTGACATGCCTCTTAATAGTGCTCCATCAACAGTTTC
TGAAGAAACTTTAAAACTTAAGGTCCAGGCTGCAGAAGGGAGGGTCTACGTGGATGTTGGTTTCTGGGGAGGTTTGGTTCCAGAAAATGC
AGAAAATGCAAGTTCTCTGGAAAGACTTCTAAATGCAGGGGTTCTGGGATTGAAGTCTTTTATGGTGCCATCAGGCATCAATGACTTTCC
CATGACAACTGCATCCCACATAAAGGAAGCACTCCCAACTCTGGCTCGATACAAAAGACCCCTACTTGTTCATGCCGAAGTGCTACTAGA
TCTTGATGGAAAAGTGGAGCTGGAGGATGGGGTCGAGAATGCTAGATCATACTCTACATATCTCAAGACCAGGCCTGCTTCAATGGAAGA
GGCTGCTATCAATCAGCTCATAACACTGTCAAAGGACACGAGGGCTGGTGGTTCTGCTGAAGGAGCTCATCTCCATATTGTTCATCTATC
TGATGCTAGAACTTCACTAAACCTCATTAAGGAAGCCAAACAAAGGGGTGATAGCATCACCGTTGAAACTTGCCCCCATTATCTCGCTTT
TGCAGCTGAAGATATTCCTGATGGAGATACTCGGTTTAAGTGTGCTCCACCCATCCGTGATGCAGCCAATAAAGAAAAACTATGGGATGC
GTTACTGGATGGAGATATTGACATGTTAAGTTCTGACCACTCACCTTCTGTGCCAGAAATGAAACTCTTAGATGAGGGTGACTTCTTGAA
AGCATGGGGTGGCATATCTTCTTTACAGTTTGTTCTACCCGCGACATGGACACATGGGCGCAAGTATGGAATAACATTTGAGCAGTTGGC
TTCTTGGTGGAGTGAGAATCCTGCCAAACTTGCTGGTCTAACGACTAAGGGGGCAATTGCTGTAGGTAACCAAGCAGATATAGTTGTCTG
GGAGCCAGACATGGAGTTCGACCTGGATAATGACTACCCTGTACATATTAAGCACCCTAGTATTTCTGCATACATGGGATCAAGACTCTC
TGGGAAAGTTTTGGCAACCTTTGTACGCGGAAATCTGGTATACAAGGAGGGAAATCATGCTTCTCAAGCATGTGCTCTCCCAATTCTTCA
TAGATAGTTAGTGCTACGAGCCTATTGGTTGTCCCTTTGACGTTCTTGGAGACGACCACATGGCATGACACATGTAGATGGAATTGATAA
CTTCATCATTCAGATCAAAGCCAAACTTTGCATGGATCTAAGTTGTTCATCGTCTTCACTCTTCTTTTAGGCGTGCAACAGGGCTGGAGT
GTATATAATCTGTTGCAGGCCCTTAGTTGATAGTCATTGGATATTTAACTCTGTAGAAAATAAATATTTCAATTGAAGCTGAAAGCTCTT
GTTGTTGATGAAAAAAAAATTAAGAATTAAATTCATCTTCATAATTTACAAATGCCATGAGAAACTAATATCAACTTAAAAAAAAAAAAA
AAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AB061260	allantoinase

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPC	leaf 6 week old	5062	3
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	7
Solanum tuberosum	STM	mixed tissues	14805	7
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	3
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	3
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (28)

Alignment image suppressed for unigene with 28 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1360	Amidohydro_1 Pept_M38_regn Pept_M38_DHOmult	14
2	24638	Amidohydro_1 Pept_M38_regn Pept_M38_DHOmult	8
5	58680	Amidohydro_1 Pept_M38_regn Pept_M38_DHOmult	8
1.1	102544	Amidohydrolase 1 - Molecular Function: hydrolase activity (GO:0016787) Metallo-dependent hydrolase composite	13
2	120791	Amidohydrolase 1 - Molecular Function: hydrolase activity (GO:0016787) Metallo-dependent hydrolase composite	8
5	131036	Amidohydrolase 1 - Molecular Function: hydrolase activity (GO:0016787) Metallo-dependent hydrolase composite	8

Preceding Unigenes (1)

Unigene	Build
SGN-U244142	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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