Sol Genomics Network

Unigene SGN-U269220

Unigene Basic Information

Unigene ID:	SGN-U269220
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269220
mRNA sequence:	Length: 1910 bp

>SGN-U269220 Solanum tuberosum #4 (24 members)
CATTTATTTTCATTTACGAATTCGCTTGTTGCCGAATATTCGTTGTTTTCGTGGTTATTGATTTTGCTATGGAGAGTATGACGCTCACTG
GATTATTGAAACATGTTGCTGAAAAATTTCCTTCTCACTGTGCGATTTCCATTTCCGGCAAGTTTCATATCACTCATGCACGGCTTCACG
AACTTGTTGAACGTGCCGCTTCTCAACTTGTATCTGCCGGTGTTAAGCATGGCGATGTCATCGCTCTCACCTTCCCCAACACAATCGAGT
TCGTGATCATGTTTCTAGCTGTAATTCGAGTTAGAGCCACGGCGGCGCCACTGAATTCAGCGTATATGGCAGAAGAATTTGAGTTTTATT
TATCTGATTCAGAATCGAAACTCTTAATAACTGCAAAAGAAGGAAATGAAGCGGCTCAAGCCGCCGCCTCCAAGCTCAAAATCCCTCATA
TTACTGTAACCCTGCCGGAAGCCGATTCTGATATTGCTTTCTCCCCGGCTCCTCCCCAATCGAACCTTCAATCGGCGTCAGAAATCGTAA
ACGACCCATCGGATATTGGACTTTTCCTTCATACATCAGGCACCACGAGCCGGCCAAAAGGTGTTCCTCTGTCTCAGCTTAATTTGGTAT
CTTCAGTGAACAACATCAAATCTGTGTACAAACTCTGTCACTCCGATTCGACCGTGATTGTGTTGCCCTTGTTTCACGTTCACGGGTTAA
TGGCCGGGTTACTGAGTTCACTCGGAGCCGGAGCATCCGTGACACTTCCATCTGCTGGTAGATTTTCCGGTACAACTTTTTGGTCAGACA
TGAAAAAATACAACGCAACATGGTACACAGCTGTGCCTACAATTCACCAAATTCTGTTGGATCGTCACCTCAGCAAACCCGAATCTGAAT
ACCCGAAGCTCCGATTCATTCGGAGCTGCAGTGCAGCACTGGCTCCATCAGTGATGGCCCGGTTAGAAGAAGCATTTGGGGCTCCTGTTT
TGGAGGCATATGCAATGACAGAGGCAACCCATTTGATGGCTTCGAACCCGTTACCCGAGGATGGACCACATATTCCGGGGTCAGTTGGGA
AACCCGTGGGTCAAGAGATGGCGATATTGAATGAGAATGGTATTGTACAAGGGCCTAATGCTAAGGGGGAAGTTTGTATTCGGGGTCCAA
ATGTGACGAAAGGGTACAAGAACAATCCAGAGGCTAATAAATCAGCTTTCCAGTTTGGTTGGTTTCATACCGGAGATGTGGGTTATTTGG
ACTCTGATGGATACTTGCATTTGGTTGGCAGAATCAAGGAGTTGATCAACCGTGGAGGAGAGAAAATATCACCTATTGAAGTGGATGCAG
TCCTAGTTTCTCATCCGGAAATTGCCCAGGCTGTTGCTTTTGGAGTTCCTGACGACAAGTATGGTGAAGAGATAAATTGTGCAGTTATAC
CAAGAGAAGGGTCAAACATTGATGAAGCAGAGGTGATGAGATTTTGCAAGAAGAACCTGGCAGCCTTTAAGGTCCCAAAGAAGGTTTTCA
TGACTGATTCTCTTCCAAAGACTGCATCAGGGAAAATTCAACGACGACTTGTCGCAGAGCACTTCCTTGCACAGATTTCAACTGCTAAAG
TCCCCAAGTTTGGAGCGTAGAAAAATTGTTGGCTATCTACGGTTCGTTCTCCTATTAACAATAAAATGAATGTGTTTTTCGATGTTACTT
ACATACTTGGTCAAGAAATTGGGACACGAGAATATATCAGTGCCTCTAGATTTCAGTAATGGCGCAAGTGTATTCTCTTCTGACCTTATC
AGGATATTGTTTGGCTAGATATCTTGTATTTCTCCTCTTAGTAATGCAAAGGTTCTTTTATTTGTAACGATGCCTTTATCTTTATCATAA
TAAAACATAGACAACCTCCA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	2
Solanum tuberosum	MXLF	Leaves	6585	2
Solanum tuberosum	PPC	leaf 6 week old	5062	3
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	11

mRNA member sequences (24)

Alignment image suppressed for unigene with 24 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	51	AMP-bind	230
2	22053	AMP-bind	93
5	57120	AMP-bind Acac_CoA_synth	16
1.1	101420	AMP-dependent synthetase and ligase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	214
2	118495	AMP-dependent synthetase and ligase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	81
5	129836	AMP-dependent synthetase and ligase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	15

Preceding Unigenes (1)

Unigene	Build
SGN-U244116	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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