Sol Genomics Network

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Unigene SGN-U269463

Unigene Basic Information

Unigene ID:	SGN-U269463
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269463
mRNA sequence:	Length: 718 bp

>SGN-U269463 Solanum tuberosum #4 (22 members)
ATTTTTTCCATTGAAAGCATACATTTTATCAGTTGCCGCAGTCGAGTCCTCCGCCGCTCCAAATCTTCAAGTTTCATAAAAAGAAGCTTC
AGCAAGGATGGGTCGTGTACGTACCAAGACCGTGAAGAAGTCATCCAGACAGGTAATTGAGAGGTACTACTCCAAGATGACCTTGGATTT
CCACACCAACAAGAAGATATTGGAGGAAGTTGCCATTATTCCTTCAAAGCGTCTGCGCAACAAGATTGCTGGGTTCTCCACCCACCTTAT
GAAGCGTATTCAGAAGGGACCTGTTAGAGGCATCTCCCTGAAATTGCAAGAGGAGGAACGTGAGAGACGTATGGACTTTGTTCCTGATGA
GTCTGCCATTAAGATCGATCTGATTGAGGTCGACAAGGAGACCCTTGACATGCTTTCATCCCTTGGCATGTCTGACCTTCCCGGTGTTGT
CAAGCAGGCTGCAGAACCACAAGCAGTAGCAGCTCTCCCAACCTTTGGTCGTGGTGCTGGTGGTTTTGGCAGGAAATACTAAGGCTACAA
TATAAGATGTGAACAAATTTAAATCGAGTTTTTGGTAGACTACATGTTTTAGATATATCTCCCTAATATTGTTCAAGGATTGTTATGCCA
AAGTTCATGTTATTTAGTTTTGAGAGATGTTGGTGAACTCTTGAATCTTTGGTTCTAAATGCACTCTATCTATTTCCAATTAAATTTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
DQ200384	40S ribosomal protein S17

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	2
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	IVROOT	Root	5850	2
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	2
Solanum tuberosum	STOL	Stolon	6462	3
Solanum tuberosum	SWST	Stolon	5942	4
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	4
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (22)

Alignment image suppressed for unigene with 22 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1051	Ribosomal_S17E	18
2	22879	Ribosomal_S17E	18
5	57014	Ribosomal_S17E	18
1.1	102135	Ribosomal protein S17e - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	21
2	119082	Ribosomal protein S17e - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	21
5	129451	Ribosomal protein S17e - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	21

Preceding Unigenes (1)

Unigene	Build
SGN-U244231	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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