Sol Genomics Network

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Unigene SGN-U269555

Unigene Basic Information

Unigene ID:	SGN-U269555
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269555
mRNA sequence:	Length: 1321 bp

>SGN-U269555 Solanum tuberosum #4 (27 members)
CTCAAATAAATATAAAGTGTTCAAAAAAAAAAAAAGTAGTTGTTTCAGTATGAAAACTGTCCTTTTCCGAACCGGTTCCGGCTCAATTCC
GGCGGTTGTTCCCGGTTCTCCGAGAGTTTCTGTTCCCGCTCGTGAATCCATCGGTAAAGTGTTTAACGGAGAGAAGAAGAAGAAAGGATG
TTCTTCTCCTATGATCTCTCTGAATTCGGAAGTCAATCGTCGCGGTATACGCCGGGTTTCATCTGAATCCGACGTGATTCGGTCGGGTTT
TGAAGGTTCGAGTGTAACTAGAAAGTTGAGTAAGATTGGATCGAGGTCATTATCGTCAATAATACCGGAGGAGGATTGCGGTTCTGAACA
GAATGAGTTGGAGGTTTTGCAAAGTATTGGATCACTGAGTTTGACGGAAGATCGACGGAGTTACGCCGGAGACTGGCATAGGAACAGTAT
TCCTGTCGATGAGCTTGTATTTCCCGGCGGTGGAATCGGCTCCACCAAAAACAGAAAATTTGGCGGCAACGGTGGCGGTAGAGATGAGTT
CGATGCAGATAGTTTAACCGGCGGAAACTCAGATCCAAGGAAAATTGGAGCATATTATAAGGAAATGCTGAATTCAGATCCTATGAATTC
TCTTCTTCTTAGAAACTACGGCAAGTATTTGCATGAGGTGGAGAGAGATTTTGTGAAGGCTGAAGAATGCTACGGAAGAGCTATACTTGC
AAGTCCTGGGGACGGAGACGTGCTTTCTCTGTATGGCAAATTAGTTTGGGAGACGCAGCGAGACGAAAACAGAGCCAAATCTTACTTTGA
TCAAGCTGTTCACGCTTCTCCTAATGACTGCACTGTGTTGGGATCGTATGCACACTTCATGTGGGAAGCAGAAGCAGAAGAAGGCGAAGA
AGAAGAAACAATAGCAGCCGGAGCATCAACGGTTGCAGCTTAGTAACTTTGCAGAAAACAGATGGAACAAATATGTACTACAGAAGCTAG
CTAGTATTATAGATGAGAGCTAATTAACTTATGTTAATGTACTTGTAAAATGTGTAAAAAGAAGTTAATAAGAGAGGAAGTATGTATAAC
TTAAATTAACTAAATCGATGTTTTAATTGAAAATGAAGAGACAAATCTGTAGAAGAGTGTGAAAAGAGAAGAAATTAAACTGGAGGTAAT
TATGAGTGTATCTACAGTTTGAAGTTTTGTTGTACATGTATTATTAACTACTATTATTAGTGCTCTTTTAAGTCTGATTTAGCACCGGAA
TGAGATCATCAATGTATCAAAGCCTTCCCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	4
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	CSCH	Tubers	5038	3
Solanum tuberosum	CSWB	Tubers	6124	2
Solanum tuberosum	SLMW	Assorted Stolon/Tuber Developmental Series	1368	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	STOL	Stolon	6462	6
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	3
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	3

mRNA member sequences (27)

Alignment image suppressed for unigene with 27 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	285	TPR	55
2	22330	TPR	34
5	59018	TPR	7
1.1	101685	Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488)	46
2	118741	Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488)	32
5	132767	Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488) Tetratricopeptide region	5

Preceding Unigenes (3)

Unigene	Build
SGN-U245507	Solanum tuberosum #3
SGN-U251469	Solanum tuberosum #3
SGN-U260945	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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