Sol Genomics Network

Unigene SGN-U271060

Unigene Basic Information

Unigene ID:	SGN-U271060
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271060
mRNA sequence:	Length: 1606 bp

>SGN-U271060 Solanum tuberosum #4 (16 members)
CTCAGCCAACAACCATCCACAACTAGTCTACTATTAAAAACTCCATAGCCTATGTTGCTCTTCTTTTTTATTATTGCATTACAAGTCACT
TTCAACATCCTAATTTGATCTTGTTCTTGTTTTGGGAGTTTGATTAATCATGGCTCAAGAAACAGTAAATCTTGAACAAGAGGTTGTTTT
GGTTGAAGAACTTGGAAATGTTAGAGTTGTTACCTTGAATAACCCAAAACAGTTGAATATCATTTCACCCAAAGTGGTAGAACCGCTGGC
AGCGAATCTTGAGAAGTGGGAGAAAGATGAGAAAGCAAAACTTGTTATCATCAAGGGAGCTGGCCGGGCTTTTTCTGCTGGCGGGGATTT
GAAAATGTTCTATAATGGCAGGAATTCAAAGGATTCCTGCCTTGAAGTTGTTTATCGAATGTATTGGCTTTGCAATCACATTCATACTTA
TAAAAAAACCACGGTTGCTCTTGCTCATGGAATCTCAATGGGTGGAGGTGCATCCTTAATGGCTCCAATGAAGTTCTCTGTTGTGACTGA
AAAGACGGTTTTCTCCACTCCTGAAGCAAGTATAGGCTTCCACACGGACTGTGGTTTCTCATACATGCTTTCTCGGCTTCCTGGTAGACT
CGGGGAATACTTGGGTTTAACTGGAGCGAGGCTGAACGGTAAAGAATTGGTTGCTGCTGGACTTGCAACACATTTTGTACCTCTGGAGAA
ACTGCCAGAGCTAGAGAAGCACTTACTAAGCTTAAACACGGGCGACGAGGATGCTGTCGGATCTGCTATCAAGGAGTTCTCGACAGACGT
TCAGATCGATGAAGAAAGCATCTTGAAAAAGCAGTCAATAATTGATGAGTGCTTCTCCAAGGATTCTGTTGCAGATATTATCAGTTCATT
TGAAACTGAAGCTGGCAAAGAGGGAAATGGTTGGATTGTGCCGGTGCTTAAAGGCCTAAAACGGTCATCCCCAACAGGTCTAAAAATCAC
TCTAAGATCGATTCGGGAAGGGAGGAAGCAAACCTTATCTGAATGTCTGAAGAAAGAATTCAGAATAACAATACATACACTAAGAGCAAG
AATATCTGGTGATGTCTATGAGGGTATCAGAGCTCTTACCATTGACAAGGACAATTCTCCGAAATGGGACCCTTCAACTCTTGAAAACGT
TGAGGACGAGCAAGTCAACCTTGTATTTGAGCCATTTGAAGAAGATTTTGAGCTCAAGGTTTCGGAAAATGAACAAGACAGGTGGGATGG
AAAGTATGAAGATTCAGCATATTGCCATCAGTGAAAAATCGAAGTACACGATCAGTTTAACAGTGTTGGCCGTTGGTCTTATAGTCTTTG
TCAATAAACTCGATTTTCGGAAGAAATTGAACTGTTCTACATTGTTCACATTTTAACAATGGTGTTTTGCTACTTATATTTCTCTTTACA
TTTACAAGAGAAAGAGAAGGATATGTGTTCTGTTATATTTTCAAAAAAATATTATAAAGTTCTTCATATTCAAGCTGTTAGAACTCTGTT
TGGATATATATATAATATATAGACTATAGTCTATACTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	STOL	Stolon	6462	2
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	3
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (16)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	144	EnCoA_hydrtse	93
2	22280	EnCoA_hydrtse	38
5	56626	EnCoA_hydrtse	28
1.1	101506	Enoyl-CoA hydratase/isomerase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	95
2	118705	Enoyl-CoA hydratase/isomerase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	34
5	131143	Enoyl-CoA hydratase/isomerase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	7

Preceding Unigenes (2)

Unigene	Build
SGN-U246779	Solanum tuberosum #3
SGN-U249433	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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