Sol Genomics Network

Unigene SGN-U271790

Unigene Basic Information

Unigene ID:	SGN-U271790
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	271790
mRNA sequence:	Length: 1646 bp

>SGN-U271790 Solanum tuberosum #4 (7 members)
TAGTTCTTGCCAAACACCATCTGCACTTTGTTCTCTCCGCCCGAATTCGTTTTTTCTTTATTATAACAAACCAACTTTTCACCTATTCTG
TGTGCATATATATTTGATTCTTCATCTCCCTCATTATTATACTGCATTTTCTCTTCATTTGTTTGAATCAAGAATCCATTTTTCTTCGTG
GGGTTTTCTAGATGGCTGCTATTATACAAGGAATTGGTGCTGCTACTGCACTAACCTCAGCCAATTCTTTGGACACCAAGAAGTCATTTT
TCTCCAATTCTCGCAGATCTTTGTCAGTTGGTGCAGAGAGGAAAGGAAGGACTTTTGTGGTTAGATCTGATGGGCGTTTGAGCTATGGTT
TGAATGGACGTGGAGGAAGAGCTGAACAATTAATTACTAATGCTGTTGCTGCTAAAGAAGATACTGCTGCAGCTTCTACTTCATCAAAGC
CAGGGCATGAACTACTGCTCTTTGAGGCCCTCCGTGAAGGTCTAGAGGAAGAAATGGACAGAGATCCCGCTGTTTGTGTTATGGGTGAAG
ATGTCGGTCATTATGGAGGTTCGTACAAGGTGACTAAAGGCCTTGCCCCAAAATATGGTGATCTCAGGGTTCTTGACACTCCCATTGCTG
AGAACTCTTTCACTGGTATGGGCATTGGAGCTGCAATGACTGGTTTGCGTCCAGTTATTGAGGGAATGAACATGGGATTTCTTCTTCTAG
CCTTTAACCAGATATCTAACAACTGTGGTATGCTCCACTACACATCTGGTGGCCAGTTTAAGATACCAGTTGTCATCCGAGGTCCTGGTG
GAGTTGGTCGGCAGCTTGGAGCAGAGCACTCTCAACGCCTTGAGTCATACTTCCAGTCAATTCCTGGAATCCAGATGGTTGCCTGTTCAA
CCCCCTACAATGCCAAGGGCTTGATGAAGGCAGCTATCAGAAGTGATAACCCTGTGATTCTGTTTGAGCATGTTTTGCTCTACAACCTCA
AGGAGAGAATTCCAGATGAAGAGTATGTGCTGAATCTTGAAGAAGCAGAGATGGTACGACCTGNGGAGCATGTAACCATTCTAACTTATT
CCAGGATGAGGTATCATGTGATGCAGGCTGCAAAAACACTTGTGAACAAGGGTTATGATCCTGAGGTCATTGATATTAGGTCTCTGAAAC
CGTTTGACCTTTACACCATTGGGAAGTCAGTGAAAAAGACTCATCGTGTGCTCATTGTCGAGGAATGTATGCGCACAGGAGGTATTGGTG
CCAGCTTGACTGCCGCTATTACTGAGAACTTTCACGACTATCTAGATGCCCCAATTGTATGTCTGTCATCACAGGATGTGCCAACCCCAT
ATGCTGGGACGTTAGAGAACTGGACTGTTGTCCAACCTCCCCAGATTGTTACTGCAGTTGAACAGCTTTGCCAGTGATCAAGTGGTAGAA
GTCTTGTGATAATCATGCCATTTATGTTCGGTTGCTTATTTCATAATTTAGGACTCAACTTCTGATCGATTTTTATTGTCTGATTTTGCT
AGAGATTTTAGTATTTGGAACTTGCGAGTCCTAGTTAAGGTGATATGTTTATTGCTTTGCCTTCTACTCACACCAAAATGGTGCTTGGAA
TCTTTATGTACTGGTAAGGTAATTAG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	132	Transketolase_CR Transketolase_C	101
2	22154	Transketolase_CR Transketolase_C	53
5	57561	Transketolase_CR Transketolase_C	12
1.1	101625	Transketolase C-terminal Transketolase central region Transketolase C-terminal-like	56
2	118698	Transketolase central region Transketolase C-terminal Transketolase C-terminal-like	35
5	130243	Transketolase central region Transketolase C-terminal Transketolase C-terminal-like	11

Preceding Unigenes (1)

Unigene	Build
SGN-U246333	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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