Sol Genomics Network

Unigene SGN-U273099

Unigene Basic Information

Unigene ID:	SGN-U273099
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273099
mRNA sequence:	Length: 1534 bp

>SGN-U273099 Solanum tuberosum #4 (9 members)
GCCAATTGTGGGGTGATGAGACTTATTGTTGGAGGTGGACGGGCAGCTGAAAGTTCTGATGAAAAGGGATCCGTGATTGTGGGTGTTCGC
ACTCTGAGTGAAGGGGGCCGTGTTGGAAACTTTTCAAGAGAACAGGTAGAGCTTTTCTGTGTGAATCACCTAATAAATTGCTCACTGGAG
TCAACAGAAGAATTTATCTGCATGGAGTTCCGGTTTACTTTACGAGACAATGCAATGTGTGCTGCTTTCCAGTTACTTCATATGGTGCTT
GAGCATAGCGTTTGGCTGGATGATGCATTTGACCGAGCTAAACAGTTGTACATGTCATATTACCGCTCTATCCCCAAGAGTTTAGAACGC
TCGACTGCCCATAAGCTCATGCTAGCTATGCTAAATGGAGATGAGCGTTTTGTTGAGCCGACTCCACATTCATTGCAAAACTTAACTCTG
GAAAGTGTAAGAGCAGCTGTAATGGATCAATTTGTCAGTGACAACATGGAGGTGAGTATGGTTGGAGACTTCTCAGAGGAAGATATTGAG
TCATGCATTCTTGACTATTTGGGAACTGTCAGACCAACAAAAGGTTTTGAGAAAGCACAGCAATACAGCCCAATCTTGTTTAGCACTGCT
CCCTTTGGTTTGCAGCATCAACAAGTATTTTTAAAGGATACAGATGAGAGAGCATGTGCTTATATAGCCGGCCCTGCACCAAACCGTTGG
GGATTTACTTTTGAGGGGAACGATCTTTTTGAGTCTGTGGGCAGTCCATCTCCAAATGACCATGTGTTGGAACAAAGTGGCACAAACCTA
CAAGGACAAGTCCGTAATCATCCTCTGTTTTTTGCCATTGCAATGGGTCTGTTGGCTGAGATCATAAACTCCAGGCTTTTCACAACAGTT
AGGGACTCTCTAGGATTGACATATGATGTTTCATTTGAACTTAACCTCTTTGACCGGTTGAAGCTTGGGTGGTATGTCATCTCAGTGACT
TCAACTCCTGGAAAGGTGCACAAAGCTGTTGATGCTTGCAAGAGTGTCCTAAGAGGTTTGCATAGCAACAGGATTGTACCGAGGGAATTG
GACCGGGCAAGACGAACGCTGCTTATGCGACACGAAGCCGAAATTAAGTCAAATGCCTATTGGCTTGGATTGTTATCTCATTTACAAGCA
CCTTCTGTACCTAGGAAGGACATCTCTTGCATCAAAGATCTCACTTTGTTGTATGAATCTGCCACCATTGAAGATGTATATGTTGCCTAT
GAGCAGTTGAAGATAGATGAGAGCTCTCTGTACTCATGTATTGGTATTGCTGGGGCTCAAGCTGGAGAAGATGTTTCTGCCTCATTAGAA
GTGGAAGAAACAGATGACGGCCTTCTACGCGTTATTCCCATGGGACGTGGGTCATCTACTATGACGCGCCCGACTACATGAATCATTAAT
GGAAACATCGCTGATCATATAAGGCTGTACGCTATCATACACGCGCATAACCTTTATGTGACAGGCTACTAGTGAATCTTACATGATTAT
TGGC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1466	Peptidase_M16 Peptidase_M16_C	13
2	25676	Peptidase_M16 Prok_nadp_idh LRR Peptidase_M16_C Ribosomal_L20	6
5	59667	Peptidase_M16 Prok_nadp_idh LRR Peptidase_M16_C Ribosomal_L20	6
1.1	101620	Peptidase M16 C-terminal	57
2	120841	Peptidase M16 N-terminal Peptidase M16 C-terminal	8
5	132102	Peptidase M16 N-terminal Peptidase M16 C-terminal	6

Preceding Unigenes (1)

Unigene	Build
SGN-U247556	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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