Sol Genomics Network

Unigene SGN-U273192

Unigene Basic Information

Unigene ID:	SGN-U273192
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273192
mRNA sequence:	Length: 1184 bp

>SGN-U273192 Solanum tuberosum #4 (7 members)
GATTCTCAAGTGCAAGGGAGAGAAATAGGAAGAAAGATTGCGTCTTCAGTAAGACACAAAGGCTTCCTTCTCTACACTCAAATCTTCTGT
TCAAGAGCTAGAAGAATTGAAGGTTGAAAAACATGGCGACTGTAATTGGAGCTCATAACTTTGCTGCTTTGAAGGCCGTTTATGAAAGAC
CATCGTTGCGGTGGATTCTGCAACCCAGAATGCAGCTGACATTTTCAGGCCGGAGGATGAATCTGCAATCTAAGAGTTCTGATGAGGTTG
AAGGTTCACCATTTGACCATAAAGGGTTATTACAGAGTCAAGAATTATATCAGTATATTTTGGAGACTAGTGTTTATCCACGAGAACCCG
CGCCTCTTAAAGAGATCAGGGCTATAACAGAAAATCATCCTTATTTTTTTATGGGTGCATCACCTGATTCAGGTCAATTGATAGCCATGC
TGTTGGATATGTTAAATGCCAAAAACACAATTGAACTCGGAGTCTTCACCGGTTATTCTCTGCTTCTCACTGCTCTTACAATTCCTGATG
ATGGCAAGATCCTAGCAATTGACCCGAATCTCGAGTCTTATGAAATGGGCCTGCCAATCATTCAAAAAGCCGGTGTTGAGCATAAGATTG
ATTTCAAACACTCTCCGGCTTTACCTGTTCTTGACAAACTCCTGGAAGATGATAATAACAAAAGTAGCTTTGATTTTGCATTTGTGGATG
CGGATAAAACTAATTACGGAAACTATCACGAGAGACTAATGCAGCTGGTGAGAGTTGGAGGTTTGATAGTGTATGATAACACACTCTGGT
ATGGATCAGTTGGTATGCCAGAGGAAAGTGTTGACAAGTTGATGAGACCAGAAAGAAGTTACTTAGTTGAGTTAAACAAATCCCTTGCTG
CAGATACCCGAATTCAAATTTCTCAAGTTCCGTTAGGTGATGGAATGACCATCTGCAGGCGACTCTTTTGACCGAGGAAATTAGGTACAA
ATCTTAGTCGAAGTTTCACCTGCAGATGACCATCGCTTCAATACCTTATTAGTATTGATTTTGTCTTCAGAAGTCATGTCGCTTGTCAAT
AGTTTCATCAAATAAGGTTTGATTAATCATCAAAATAAATGAAATTGTCTTGGAGGGTTATATGCTTATATATATATGAAGGAAGAGGTG
AACTTTTTTTCCTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (7)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	390	Methyltransf_3	43
2	22220	Methyltransf_3	43
5	56438	Methyltransf_3	42
1.1	101787	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) O-methyltransferase family 3 - Molecular Function: O-methyltransferase activity (GO:0008171)	37
2	118672	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) O-methyltransferase family 3 - Molecular Function: O-methyltransferase activity (GO:0008171)	37
5	129169	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) O-methyltransferase family 3 - Molecular Function: O-methyltransferase activity (GO:0008171)	34

Preceding Unigenes (1)

Unigene	Build
SGN-U246638	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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