Sol Genomics Network

Unigene SGN-U273384

Unigene Basic Information

Unigene ID:	SGN-U273384
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	273384
mRNA sequence:	Length: 1106 bp

>SGN-U273384 Solanum tuberosum #4 (8 members)
CTCCCTCTTCTTCACTTCTTCGTAGCGCTCGAAGAGCAATTAACCAGCAATGGCTGTAATGGGAATTGGGGCAGCTAATTGGTTAAAGGG
AAGTGGAACTCTGTTATTTTCTTGCCGAACAAATTCAATTCCTGCAGTAGTTTCATCATCTACTGTTATTGCTTCACGCTCAAGGGTGCA
CTATTGTTCCTCAACATTCTCACTTCAGCACCAGAAAAAGAACAATACCCTTTTCAGTACTGGTGTCAATGGTCATAGAATTGGTGATTG
GGGTAGTCAGATTGCGAAGTTATACTTTAATTTTTACTGTACGGCACAATCAAATGTGAGTGTAGAAGAGAAGGATTCGTCTGGTGAAGT
AGTTGAGGAGGATGAGGAGAGTAAGATGAGGAAGATTAAGGATGCGGCGAATAGTTTGGATATTAGGGTTGGGAGGATAATTAGAGCGTG
GAGACATGAGGAGGCTGATTCACTTTATGTTGAAGAGGTTGATGTTGGTGAGGCTGAACCAAGAATCATTTGTAGTGGGTTGGTTAAGTA
TGTACCTCTTGATCATCTTCAGGAAAGAAGTGTGATTGTTCTTGCAAATTTAAAGCCAAGAAATATGCGTGGTGTCAAATCAAATGGAAT
GCTGATGGCAGCGTCTGATGCATCTCATGAGAATGTGGAACTTCTAGAACCACCTGAAGGTGCAGTACCTGGGGAAAGGATATGGTTTGG
TTCTGCTGATGAAAAGGATAATCTACCTGATGTGGCAACACCCAACCAGGTAGCAAAGAAAAAGATTTGGGAGCTAGTACAACCACGTCT
AAAAACAGATGGTGCATCCGTTGCTGCACTAGGAACGCATTGTATGCGAGCTTCAACAGGTGTGGTGGTCAGCCCATCTCTAAAGGATGC
AAATATATCATAATGATATCCTAAGGTTTATGCAGCTTTTTGTAACTTATTCTATCTATCTTCATAGTTACATCTTGAAAAATATCTTAT
AGCATGGGTTGCAAAAGAGTGAAAATGTTAGAAAAGGTGGGAGAATGTTACAACCTTTTCCTTTGGTTTAAAGAGACCATGGTAAGTAAA
AAATTTGAGTTTCTTAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	795	PheT_bact tRNA_bind MetG_Cterm	24
2	23422	PheT_bact tRNA_bind MetG_Cterm	13
5	63083	PheT_bact tRNA_bind MetG_Cterm	3
1.1	102108	Nucleic acid-binding OB-fold subgroup Nucleic acid-binding OB-fold - Molecular Function: nucleic acid binding (GO:0003676) t-RNA-binding region - Molecular Function: tRNA binding (GO:0000049)	22
2	120034	t-RNA-binding region - Molecular Function: tRNA binding (GO:0000049) Nucleic acid-binding OB-fold - Molecular Function: nucleic acid binding (GO:0003676) Nucleic acid-binding OB-fold subgroup	11
5	135120	t-RNA-binding region - Molecular Function: tRNA binding (GO:0000049) Endothelial monocyte-activating polypeptide II precursor pro-EMAP II - Molecular Function: tRNA binding (GO:0000049) Nucleic acid-binding OB-fold - Molecular Function: nucleic acid binding (GO:0003676) Nucleic acid-binding OB-fold subgroup	3

Preceding Unigenes (1)

Unigene	Build
SGN-U247558	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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