Sol Genomics Network

Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U580739 in the current build, Tomato 200607 #2

Unigene SGN-U313031

Unigene Basic Information

Unigene ID:	SGN-U313031
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313031
mRNA sequence:	Length: 1933 bp

>SGN-U313031 Tomato 200607 #1 (24 members)
ACAATTATTACAGCAACATTAGAATTTCAAGATTTGGATGTTGCCTTCTTTTCAACTTACCATATATTTGTCCAAATTTTTGAGGATTTC
TAAGCTGCTGTAATCAATCTTTTTTGACCCCCAAACAACAAAGGCTGCAACTTTCATACTTCATCTTTATCTTTATCTTGGCCAACACCC
CATTTCAAAATTTCAGCTCAAATAAAAGGTTCTTTAAGAAGGATTACGCCTGCATTCTTTAAAGGACTGTGCAAGTATCTCAGTTATGAA
TCAGGCAAAAATCAAGCGCAGAGTTGGTAAATATGAAATGGGAAGGACAATTGGTGAGGGAACATTTGCTAAAGTTAAGTTTGCGAGGAA
TTCGGAGACAGGAGAAGCTGTAGCGATCAAGATTCTTGATAAGGATAAGGTCCTTAAGCACAAAATGGCTGAGCAGATAAAGCGGGAGAT
AGCTACAATGAAGTTAATTAGACATCCACATGTCGTTCAGTTATACGAGGTGTTGGCTAGCAAGACAAAGATATTCATTGTTCTGGAGTT
CGTTACAGGCGGAGAGCTCTTTGACAAAATTGTAAATCATGGACGGATGCATGAAAAAGAAGCAAGGAAATACTTTCAGCAGCTTATTAA
TGCTGTTGATTATTGTCATAGCAGGGGAGTCTACCATAGAGATTTAAAGCCTGAGAATTTACTCTTGGATGTCAATGGAAACCTCAAGGT
TTCTGATTTTGGATTGAGTGCTCTGTCCCAGCAAGTCAGGGATGATGGCTTACTCCACACCACATGTGGAACTCCCAACTATGTTGCTCC
TGAGGTACTCAACGATCATGGATATGATGGTACAACCGCGGATCTGTGGTCGTGCGGAGTCATACTCTTTGTATTGCTTGCAGGTTACTT
GCCTTTTGATGACTCCAATCTTATTAACCTGTATAAAAAAATCTCTGCTGCTGAATTTACATGTCCTCCTTGGATGTCTTTTGGTGCTAT
GAAGTTAATTACTCGCATCTTGGATCCGAACCCTATGACACGTATCACCATCTCAGAAATTCTGGAGGATGAGTGGTTCAAGAAAGATTA
TAAATCTCCCATTTTTAATGAGAAAGGAGATGCCAACCTGGATGATGTTGAAGCTGTCTTCAAGGATTCTGAAGAACATCATGTAACAGA
GAAAAAGGAAGAGCAGCCAACTCCCATGAATGCATTCGAGTTGATTTCAATGTCAAAAGGACTCAACCTTGGGAATCTCTTCGATGAACA
GGAATTTAAGAGAGAAACAAGGTTCACATCTAAATGCTCGGCCAATGAAATTATCAGTAAGATTGAAGAAGCTGCAAAGCCCCTCGGTTT
TGATGTTCACAAAAAGAACTACAAGATGAGACTTGAAAATGTCAAAGCTGGAAGAAAAGGGAACCTTAATGTTGCCACTGAGGTATTTCA
AGTTGCCCCTTCTCTTCATATGGTTGAAGTCCGAAAGGCAAAAGGAGATACTTTGGAATTCCACAAGTTCTACAAGAATCTTTCGACTAG
TCTAGAGGATGTAGTGTGGAAAACTGAAGAGGACATGCAAGCTAGGTAGTATTACTACCATGAACTGCAATTGCATAAGCTTTTGCTGGT
CCCACAATCTGTGTAAAAAACTTTGCAACTTGTTTCTTTCTTTCCCTTTTTTTTGTCATTTGGTCTGTTCTTTGTAGTGGGACTTTTTTC
TCCCATGAGCTAATGGCCAACTGTTCTATTTCATCATGGAGTAGGACTTTTGTTCCTATTTGATTTGATTTGCAGTTTGTATAACAAATA
TACACTTTTGAGAAATGTATACAACTCTTCAGCCCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAATTTGGGGGGGGGGGGGGCCCCCCCCCCCCCCCC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (17)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LE12	Fruit 12 days post anthesis	276	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum lycopersicum	cTSB	seed	1880	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1

mRNA member sequences (24)

Alignment image suppressed for unigene with 24 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 7 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128941	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	167

Preceding Unigenes (2)

Unigene	Build
SGN-U213273	Lycopersicon Combined #3
SGN-U213278	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: