Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U578661 in the current build, Tomato 200607 #2

Unigene SGN-U313199

Unigene Basic Information

Unigene ID:	SGN-U313199
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313199
mRNA sequence:	Length: 3367 bp

>SGN-U313199 Tomato 200607 #1 (25 members)
GATACTTTTGATGGAGTTTTTATAATTTGTGTTGTGTTGATTGTGCTGGCGTCTATGTTCCATTTGTTGTGGAATCTATAAGATTTGTGA
TTGTTGTGTTATGGAAAAAAGAAAGAGAAAGCGACTCTGTTGAGATTATGTTTCAGTGCCATGAGATCATGAATAATTGGTTTGCGTGCT
ATTGTGTTATGAATGGTTGCCTTGCAAATGCCTATGTTGAATTAGATGGTTATGTAGCGTATGTATCTTAGTGGAATGCTGCTTTATATC
ACTGAGCTTTTGAGCTTTGTGGTTATATTAATCCTATCCACAATTTTTTATTCACGTAGTGTATAATCCTCAGTTTCAGGGCTTTTGCCT
TGGCTGATTGATTGCATGAGACCTTCACTTTTGATTGATTGAGTGGCAGCAAAATATATCCGTAGGAACGATTGACAACTAATTTGGCAT
TCTTTGGGCTTAGAATAGTTGATGAAATTATCTAGTTTTACTCTTAGCCTTGAAAAAATCATAGTTAAATATATAGGTACCCACAGGTTT
AAGATATGGGGTACCTGTGTGGGTGGTTTAGCTATATTGATGTTTTGTGACGGTTTATAAACTGCAGTTATCAAGTAAAATTCCAGTGAG
AAGATGATGAGGAATTTAAAGAAAAAGCATATAGTAAAGATCTTGATTAAACAAATACTCTTCTTTTTTCCTGTTCGGTCCCTTTTTGGT
TATGAAGACGGAGACTATAAACACAAGCATTTATAAGCATGTATTTGGTCAATCTGAAGTTGCAAAGCTGGTGTCTCGATCAAATGCAAG
TAGTAGTCATGATAGTGCCATACTCATTGGACATCTATGTCAATCTTCTGTTCAGTTTGTTCATCACTCTTTCCTTTTTCTATTTTGCGT
TAAACTTCTGATGCTGGTATCCGTCGAGGCTATTGGTATTTGCAACTCACTTTTCTTTCAATAATAATAGGCTGACTTAGGATAGGGAGT
TTCTAGTGCTTTCCAAGCCTTCTGGTATGCTTTATCTTCCAACCAATCTAATTTTGGGCTCTTGAAGGAGATCATCTGGTATATGTGGTT
GTAGCTGTTCTTGACTGCTATAATGGAAGTGTAAACTCTACCTACTTTCACATGAGAGGTAGACACTGGACTGTGGAAAAATAAGATATC
GTGGCACATGATGCTTTTTGTTTTGCAACTTTAGTTTTTGTGAATTTTAGTAAAATGCTAGGCATGTGCGATGATGAGGTCTTTCGTTAA
CAAAGATAGGCCTTGGGGTGAAAAGGTGAACAAAAAAGAAAGGAAAATAGAAAGATGACCACCGGAGGCTGGAGAGTATGGATCAGTTGG
ATGTTGTAACCCAACAGATAAGATTTTCCTTTCTGACAATGAAAAAATCCAACTAACAGACTGTAGGAATTTATAAAATTCTTCTTCAGG
GTAAGATTCCCTTGTTAAAGTGACATGGTGCAGAAGCTCAGACAGAGGTAGGGTTGTCTGTGATGGACAACAAATAATTCATCTCTGCAG
TCTCACACTTTTCCTAGTATTTTTCTGTCAGGATGGGTTTGATTGTTGTCCATTGCTTTTACCTTAGGTTGGACTTCCCTTCATCAGTAT
CTCTTTAAATGGAGTTCTCCAAGAATGAAGTCATCATGCAATCATTATTAGCTACTGCTGGATGCTTTGGAGCTCCTCAATGCTTCACGA
TAGTTCTAGTTTGGTTCCTTTTGAACCTACTTGTGGATTCTTGTAGATCAACTTGTTTTGATGAAATTCTCATGGTGGAGTTTGCTGATT
GGAGCTGTCAACCTTTGTTGGAATTTGTTGTTGCTGGTTTCAATTGGTGTTCATGTGCGACAACAAGAACATTGTCTGAGGTGTTTTGCC
CATTTGGAGGGCCAAGTAGTCATGCCTTTGTAGGTTTAGGATTTTTTCCCTTGACTATTTTCTGAATGCAGGGCTTGTAGTTGTTAAATT
CATCCATAAGGCTAAATGGGAGACATAGTGATTGAACATTCAGGGTCGCCACATTATGAGGCCTTGAACTTGCAAAATGTTACAACATCT
GAGAATGATGCTGATCTGGTTCGGAGTTACTGTGGGGGCTTCTTTCCTGAGGGTAGTACACATGAAGAAAAATCCACTTGCACCGAAGCC
CTCGACAGAGGATTCTTTGAATATGGATGTTCCCACTATCGCCGTAGATGTCGCATTAGAGCCCCATGCTGCGATGAGATGTTTGACTGC
AGGCATTGTCATAATGAATCTAAGAACAATATCAACATTGACCAGAAACTTCGACATGAGATTCCTCGTCACAAGGTGGAAAGGATTATA
TGCTCACTTTGTAATACAGAGCAAGAGGTTCGGCAAGTTTGCATCAATTGCGGTGTGTGCATGGGGAGATATTTCTGTGAAACGTGTAAG
CTATTTGATGATGATATATCCAAAAGACAGTATCACTGCAGTGGTTGTGGGATATGCAGGATTGGTGGGATGGAGAACTTCTTCCACTGT
CCCAAATGCAGATGTTGTCATTCTGTTCTATTGAGGAACAGCCACCCCTGTGTAGAGGGGGCAATGCATCATGACTGTCCTGTTTGTTTT
GAGTATCTCTTTGAGTCGATAAATGATGTAACAGTCATGCCTTGTGGACACACTATTCATAAGAACTGTTTGAAGGAGATGCAGGAACAC
TACCAATATGCTTGTCCTCTCTGCTGTAAGTCGGTATGTGATATGTCAAAGGTGTGGGAGAAATTTGACATGGAAATTGCTGCAACACCA
ATGCCCGAACCTTATCAAGACAAGAAGGTTTGGATCCTTTGTAATGATTGTGGAATCACCTCAGAAGTGCAATATCACTTTGTGGCCCAG
AAATGTCCATGTTGCAAATCTTACAACACCCGCCAAACAAGAGGTGGATAAAAGGACCAAATATCAATAGCCAATCTGGCTTTCAAGTGA
AAATGATCCCACACCCTATGTGGCTAGGGTGGTACCTCTGAGTGGGAATGATTGGGCTTTACAAGCTAAGCTTGTAGAAGAAATAACGGA
AAGAAGGGGTTCTAATATGATCCTGCTTGTAACACTTCTGAGGTTATCGTGTTTTCGCGTTTTAGTAGTACGTGCGTTTTATATGCCAGT
GCAATTTTCAAGACACTGATTATTTGTTCAGTGTTAGCCCTATTATTGTTGGCATGTGTGATTCAATCCTTTATAGCACAAAGCGAGTTG
GACTGTGGCATGTTAAGTGGCTGAGAGACTTGATGTGTTGTGTGATATGTATTTTCCAGTTAATTACTCACTTGAAGATAAATTTGTATT
ATTACTTCATATTTATTAAGTAGTATATTTCTTTAAG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	5
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (25)

Alignment image suppressed for unigene with 25 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (2)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	104087		5
2	126789		2

Preceding Unigenes (1)

Unigene	Build
SGN-U213362	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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