Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U585129 and SGN-U588845 in the current build, Tomato 200607 #2

Unigene SGN-U313619

Unigene Basic Information

Unigene ID:	SGN-U313619
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313619
mRNA sequence:	Length: 1433 bp

>SGN-U313619 Tomato 200607 #1 (71 members)
ATTGGCGGCCAATCGGCCGAATTGAAATGCACAAACCAATTTATAATATTTTTGTAACAACACACTTTTTTTTATTTTTTTTGCCAAAAT
GGCCACACCTACTATTATTTTGAGCTTCTTGTTGATTTTTGGAGTGGCTATTTGTCAAAGTGAAGCTAGGGCATTTTTTGTGTTTGGTGA
TTCACTTGTTGATAGTGGAAATAATAATTATTTGGCTACTACTGCAAGGGCTGATTCACCACCTTATGGTATTGATTATCCAACACGTAG
AGCAACTGGTCGTTTCTCTAATGGCTACAACATTCCTGACATTATCAGTCAACAAATTGGTTCATCAGAGTCACCACTACCTTACTTAGA
TCCAGCTCTTACTGGACAAAGACTTCTTGTTGGTGCTAACTTTGCATCTGCTGGAATTGGAATACTAAATGACACTGGAATCCAATTTAT
TAATATTATTCGAATGCCACAACAATTGGCTTATTTTAGACAATATCAAAGTAGAGTAAGTGGCCTTATTGGTGAAGCAAATACTCAAAG
ACTTGTAAATCAAGCTCTTGTTCTTATGACTCTTGGAGGCAATGATTTTGTCAACAACTATTATCTTGTGCCCAATTCTGCGCGATCACG
CCAATTTTCTATTCAAGATTATGTCCCTTATTTGATAAGAGAATATCGTAAAATCTTGATGAATGTGTATAATCTTGGAGCTCGTCGTGT
AATTGTAACTGGAACTGGACCGTTAGGTTGTGTTCCAGCAGAACTAGCTCAACGTAGCAGGAACGGGGAATGTTCACCCGAGTTGCAACG
AGCTGCAGGCCTGTTTAACCCCCAGCTTACGCAAATGTTGCAGGGGTTAAATAGTGAACTAGGCAGCGATGTTTTTATTGCTGCAAATAC
ACAACAAATGCATACGAATTTCATTACTAATCCACAAGCATATGGATTTATAACATCAAAGGTAGCATGTTGTGGACAAGGACCATATAA
CGGTCTTGGTCTATGTACACCGCTCTCTAATTTGTGCCCGAATAGAGATGTTTACGCGTTTTGGGACCCGTTCCATCCATCTGAGAGGGC
AAATAAGATCATTGTGCAGCAAATCATGTCTGGTACAACGGAGCTTATGAATCCAATGAATCTCAGTACGATTCTGGCTATGGATTCACA
TGCATAAGACATATCTAAGATATCTGGAATCTGATTCACTTGTACCTTTTTTGTTGCTAATTTTTGGCTATAAATAAGATGTATGCAACA
CTTCATGTTGTGCTACTTTTAAATTTACAAAAAAGTTTGGTTGTGTGCTATGTTTTTATTCACATAATTCAGTAATCTAATTTGTAGGGT
GGAGTGTGATATTGTTGAAGATGTAAACCAAAGTGTTTTTATTAATTTATATAGTAATATATTTTCAGTGTTTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (17)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	12
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LE08	Fruit 8 days post anthesis	339	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	6
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	4
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	5
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	6
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	13

mRNA member sequences (71)

Alignment image suppressed for unigene with 71 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (6)

Annotations (manual: 1 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101406	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	261
2	118422	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	248
5	128942	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	163

Preceding Unigenes (1)

Unigene	Build
SGN-U213809	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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