Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U578917 and SGN-U580430 in the current build, Tomato 200607 #2

Unigene SGN-U315695

Unigene Basic Information

Unigene ID:	SGN-U315695
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315695
mRNA sequence:	Length: 2607 bp

>SGN-U315695 Tomato 200607 #1 (37 members)
GTAATCATATATCCATGGCGGTTTTGAGCTGCCAAACATACTTTATCAATTCTAAAAAAATTATAAAGACAAAGCCGTTCATCTGTTGCT
CATCATCTCAAAACAACAATGTGAAGGTAATCATAAATGGAGCTGCTAAGGAAATTGGCAGAGCTGCCGTTATTGCTGTCACTAAAGCTA
GAGGAATGGAATTGGCTGGAGCTGTTGATTCTAATTTTGTTGGACAAGATATTGGGCAGGTTTGTGACATGGAAGAGCCTCTAGAAATAC
CAATAATTAACGACCTTACCATGGTCTTGGGTTCAATATCCCAGTTAAAAGCAACGGGAGTAGTCATTGATTTCACTGACCCTTCTACAG
TTTACGACAATGTCAAACAGGCAACAGCATTTGGGATGAATAGTGTTGTTTACGTTCCCAGAATTAAGCAGGAAACTGTCATGGCTTTAT
CTATGTTATGCGACAAGGCCAGCACGGGTTGTTTGGTTGCACCAACTCTTTCAATTGGATCCATACTTCTTCAACAAGCAGCAATTTCAG
CTTCTTTTCACTACAACAATGTTGAAATTGTTGAGTCTAGAGCTAATCCACTGGATTTTCCAAGCCAGGATGCAGTTCAAATTGCTAACA
ACCTTTCCAATTTGGGTCAGCTGTATAATAGAGATGACATTTCTAGTGATATTCCGGCAAGGGGTCAAGTTCTTGGGGAAGACGGAGTGC
GTGTTCACAGCTTGGTTCTACCAGGGCTCCCATCTAGTACATCAGTTTACTTCTCGAGGCCAGGAGAGGTTTACACACTAAAGCATGATA
TCACAGATGTGCAATGTCTCATGCCAGGCTTGATTCTGGCCATTAGAAAAGTTGTTCGCCTCAAGAACCTGGTCTATGGCTTGGAGAAGT
TTTTATAAGAACAGATACTAAGAGGCTAATGGGACCATAGGCAACACTGAGATATCTTGTAAAGAGTACATGAATGGAGAGATACGAAAG
ACAGATGCAGCCAAGAGAGAAATTCCCAATATACTGCTGTCAAAAGAATGTTACAAAAATGTCGGATCACAATGAGCAACTTATTAAAGA
GCTGATAAAATCTGAGTATTTTTTTGTCCATGTCGCCTAAAGCCGGAATATAGAAATTGTACTCTCTAAAAGATGTCAAACTTAAACTGA
ATAATATCCCACCACCCCCACACCCCACCTTTTTTTCGAAATTCATACTTCCAATCTAAATTTGAGACAGCTCTTCATTCTTAAAAAAAA
AATAAAAAATTAGGAATATAAAAAAAACTCGACACCACTCAGTCTTCTACACAGAGTGCTGTTAGGTGAAAAAAAAGAAAGAGAGAGCTC
ACAAAAATGGCGATGAGAACAGTATGTGTAACAGGAGCTTCAGGCTACATAGCTTCATGGCTAGTCAAATTTTTGCTTCAGCGTGGTTAT
ACTGTTAAAGCTACTGTTCGCGATCTCAATGATCAAAAAAAGGTAGATCACTTGACATCCCTGGATGGAGCTAAGGAGAGACTCCACTTG
TTCAAAGCGGACCTACTGGAAGAAGGTTCCTTTGATGCTGTTGTTGAGGGGTGTGAAGGCGTGTTTCATACAGCATCTCCTTTTTACCTT
GGAGTCAAGGATCCACAGGTGGAGATGATTGATCCTGCACTGAAGGGGACACTTAATGTTCTTGGATCAGTTGCAAAGACACCATCTGTT
AGAAGAGTGGTCTTGACATCATCTGTTGCAGCAGTTGCTTTCAATGGCAAGCCAAGAACCCCTGAAGTGGTGGTTGATGAAACATGGTGG
TCAGATCCTGACTTTTGCAGAGAATCACAGCTCTGGTATGTGCTTTCGAAGACATTAGCTGAGGATGCTGCGTGGAAGTTTGTGAAAGAG
AAAGCTTTCGATATGGTTACAATAAACCCAGCAATGGTTATAGGCGGTTTGTTGCAACCAACGCTTAATACAAGTGCTGCTGCTATCTTA
CAACTGCTAAATGGTTCTGAAACATACCCAAATTCTACATTTGGTTGGGTTAACGTGAAAGATGTCGCCCTTGCACATATTCTGGCATTT
GAAAACCCTTCAGCTAATGGTAGATATTTAATGGTGGAGTCAGTTGCACACTACTCTGAGATAGTTAAGATATTACGCGAGCTTTACCCT
ACACTGAAGCTTCCAGAAAAGTGTGCTGATGATAAGCCATTTACGCCAACGTACCAGGTTAACGTAGAAAGAGCCAAAAAATTGGGTATT
GAATTCATTCCTTTGGCGGAAAGCGTCAAGGAAACAGCTGAAAGCTTGAAAGAGAAGAAGTTTTACTGAAATGCTTAGCCTTATTGTGAA
TGAATCTGGAAATTGTAGAGAACATGCTTATGTACACCTTCATGTTTTACTAAAACCTTTCGTATTATGTCGTTTTGTGATCCGCAACTT
TAATGGTGTCGTTAAGTTTAAACATTCCGTGGATGTAGTTGAATCAAAGATACGATCGATGTGATCTTGTGTTTGGAGGTTAAAAAAAAA
AAAAAAAAAAATTTTGGCTTGTTGTTTAAATATATACCTTCTTCCATGGCTAATTGTACTATATACATACGAATTACTATTACTAAT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
par2	phenylacetaldehyde reductase 2	phenylacetaldehyde reductase

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	3
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum lycopersicum	cTOS	suspension cultures	8026	3
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (37)

Alignment image suppressed for unigene with 37 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 8 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101435	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	166
2	118460	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	116
5	129000	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	71

Preceding Unigenes (1)

Unigene	Build
SGN-U214591	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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