Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U575460 in the current build, Tomato 200607 #2

Unigene SGN-U315747

Unigene Basic Information

Unigene ID:	SGN-U315747
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315747
mRNA sequence:	Length: 2116 bp

>SGN-U315747 Tomato 200607 #1 (33 members)
TAGAATAAGCCACATAGATAAAAGGTTTTGTTAATGTCCTAAATAGAGAGTAAATTTTTGTTAGTGTAGTTTGTGTCTGAACTCAAATGG
CTGTGGTTGGTCCTCTCTCTGTGATTTTCAACCTTCTTCTCTCTTTACTTGTATGCCATCTCCATTTCACCATTCTCATTCAAGGAAGCG
GAGGTGAAGGGAGATGGGAAGATAAGTATCCATTTATAAGAGAAGCAAGTAGATTTGATGATTATAAAAATTCATATGATTATATTATAG
TTGGTGGTGGAACAGCTGGTTGTCCTTTAGCAGCCACATTATCAAAAAAATTCAAAGTTTTATTAGTTGAAAGAGGTGGAGTTCCATTTA
CAAATACAAATGTGTCATTCATGCAAAATTTTCACATCTCTCTTGCTGACACTTCATCTACTTCTGCTTCACAATTCTTCGTTTCTACCG
ATGGGGTTTTTAATTCTAGAGCTAGAATTTTGGGTGGAGCCACTTGTATTAATGCTGGCTTTTATACTCGCGCTGGTCCCAGTTACATTA
AGAAAGCGGGATGGGATTCTAAATTGGTGAATGAATCATATCCTTGGGTTGAGAAACAAATTGTTTATAGACCAAACTTGGCTCCATGGC
AAGAAGCAGTAAGGGAAAGTCTACTTGAAATTGGTATCTCACCTTTCAATGGATTCACGTATGATCACATCTATGGAACCAAGGTTGGTG
GGACCATATTCGACCGCTTTGGACGTCGTCACTCTGCTGCTGAACTACTTGCCTCTGCTAATCCTAACAAGTTGGATGTTCTGGTGCATG
CCACAGTTCAAAAGATTGACTTTGATACATCAGGAAAGAAGCCACGGGCAGTGGGAGTCATTTTCAAAGATGAAAATGGGAAAGAACACA
AGGCATTTCTTTCGACTAGGAAGGGAAGTGAGATTATAGTGTCATCTGGTGCAATTGGGAGCCCTCACATTCTGATGCTTAGTGGAATCG
GACCAAAGGCCGAATTGGAAAAGTTCAACATCCCGGTGGTTCTTGACAATAAGTTTGTTGGTCAAGGAATGTCAGACAACCCCTTGAACA
CGATCTTCGTCCCCACAAATAGGCCCGTTGAACAGTCACTGATTCAGACCGTAGGGATTACGAAAAAGGGAGTCTACATTGAAGCAAGTA
GTGGATTTGGACAATCAGGAGATAGCATCAGTTGCCATCATGGAGTCGCTTCAGCTGAGATTGGGCAACTGTCCACCATTCCTCCGAAAC
AGAGAACAGTAGAAGCAATTGAAGCATATCGAAAAAGCAAGAAAAACATACCACACGAGGCGTTCAAGGGAGGTTTTATCTTAGAAAAGA
TAGCACTACCTTTGTCAAGAGGGAACATTAGCCTGGTGACTACTAATCCTGACGACAACCCTTCCATCACCTTCAACTACTTCAGCCATC
CACGTGATCTAAAACGATGTGTAGATGGTATACGCATTGTGGAGAAGATAGCGAAATCTAAACACTTCACCAACTTCACACAGTGTAACA
AAGAGACACTAGATAGGCTGCTTAACATGAGTGTCCAAGCTAATGTTAATCTAATACCAAAACACACTCATAACACAGAGTCGTTAGAAC
AGTTCTGCAAAGACACTGTGATCACAATATGGCATTACCATGGCGGATGTCAAGTTGGAAAGGTGATCGCTCCCAATCACAAGGTTCTTG
GTGTCCATAGGCTCCGCGTCATCGATGGTTCCACATTCAAAGAGTCTCCAGGCACAAATCCTCAAGCCACAGTGATGATGATGGGCAGGT
ACATGGGAGTGAAGATTCTGAGAGAGAGATTAGGAAAAGCAGCTGGTTTCTAAAGAATTAGATAACTTTGAAGTAGAAGAAGATTAGACC
TATTCTTTAGTTTGTTTTGTTAAGGGGTCTTTACTATTCTAATTCTTAGCAAGCAAGTGTGTGTAGTCTGTCAAGATTGGCTTGCCATTA
AAAAAGGTGTTTCTGTGGTGTCTGTGTGAGGTTGGAATTGGAACTTTTTGTGCTGTTGTATTCACATTGTAATGTGTGAAGTTCATGCTT
AAGTATTATCTAACCTTGCATCTAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LE12	Fruit 12 days post anthesis	276	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	5
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	6
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	5
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	3

mRNA member sequences (33)

Alignment image suppressed for unigene with 33 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102148	Glucose-methanol-choline oxidoreductase - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491) GMC oxidoreductase - Molecular Function: oxidoreductase activity acting on CH-OH group of donors (GO:0016614) - Molecular Function: FAD binding (GO:0050660)	20
2	119098	GMC oxidoreductase - Molecular Function: oxidoreductase activity acting on CH-OH group of donors (GO:0016614) - Molecular Function: FAD binding (GO:0050660) Glucose-methanol-choline oxidoreductase - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491)	20
5	129469	GMC oxidoreductase - Molecular Function: oxidoreductase activity acting on CH-OH group of donors (GO:0016614) - Molecular Function: FAD binding (GO:0050660) Glucose-methanol-choline oxidoreductase - Biological Process: electron transport (GO:0006118) - Molecular Function: oxidoreductase activity (GO:0016491)	20

Preceding Unigenes (2)

Unigene	Build
SGN-U214871	Lycopersicon Combined #3
SGN-U214872	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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