Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U575837 in the current build, Tomato 200607 #2

Unigene SGN-U317489

Unigene Basic Information

Unigene ID:	SGN-U317489
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317489
mRNA sequence:	Length: 1497 bp

>SGN-U317489 Tomato 200607 #1 (19 members)
TTCTCGCTGCTGCGACTTCTCACTCCTTATTACGTAATTACTCCAAAATGACCATGTTTCTTCCTCATCGAAATTTCGCCATCATGGCCT
CCGGCGCCGATGAATTTGTCAGGGGACATATCCACCCGAACGGTGTCGCCGTTATCACTCTCGATCGTCCTAAAGCTCTCAATGCAATGA
ACTTAGATATGGATATCAAATACAAGAGTTTCCTGGATGAATGGGAAACAGACCCAAGAGTAAAATGTGTTTTGGCTGCCAGTAGTTCTC
CCCGTGCCTTTTCAGCAGGTAGTGATATCAAGCAGATTGCAGCAAAAAAACAGCAGTCAGATATGATAGAGGTATTCACAGCTGAGTATC
CTATAATATGTAAAATCTCCGGGTACAAAAAGCCTTACATCAGCTTCATGGATGGCATCACAATGGGCTTTGGAATTGGTTTATCTGGTC
ATGGTCGTTACAAGGTTATTACAGAGAGGACTGTTCTAGCGATGCCAGAAAATGGAATTGGGTTGTTTCCAGATGTCGGTTTTTCCTATA
TAGCGGCACATGGTCCTGGAGAAGGCACAGTTGGTGCTTATCTTGGATTGACTGGAAGTAGGATATCAACACCTGCTGATGCTCTCTATG
TTGGTCTGGGAACTCATTATGTCCCTTCTGCAAATTTGGGCACATTGAAGGAAGCTTTGCTTGCCACTAAATTCTCCGAGGATCCAGATG
AGGAGATAAAACAACTGTTGACGAAATACAGCAGCAACCCTAATTCAGAACCCCGTTTGAAGTCACTTTTACCCAGAATAATTTCTACTT
TTGCTGGTGACAAGTCCATTAGGGAGATACTAGAAGAGCTAGAACATCATCAGCAAAGCACTGATACATTGGTGGCAGAATGGGCAAGGG
ATGCTCTGCAAGGGATTAGTAAGGGGGCCCCTTTTTCTCTCCGTCTCACCCAAAAGCTCTTCTCTAAGGTAGCATCTGCACGTGGCGAAA
CTGACAACGACTTGTCCAGGCTCACTGGTGTCATGAGAACTGAATATCGCATTGCTTTAAGGTCCGCTCTACGGAGCGACTTTGCTGAAG
GTGTCCGAGCAGTCTTAGTGGACAAGGATCAGAAGCCAAAGTGGAAACCAAGTTGCTTGGAGGAAGTTGAGGATAGGGAGGTGGAAGCTC
TTTTCGAACCTCTGAGCCCAGATATTGGAGAATTGAATGTGTGAGCATAATGCATATCCTGAATCTTTCCAGCGGGGTAAGGAATAACCA
AATGATTCTCTTTTCATTACAACACAACTAACTAATTAATGAGGTATAGTTGGTTAAAAGGTGTTTATGTGAATACCTTCAACCACTCCA
TTGTATTACTTATTACTATTTGCTTTTGGAGTCGCTATTTAACAAAAAAAGAGNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTNNGAAAAAAAAAAAATATTTCGAAAAAAAATTTTTTTAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1

mRNA member sequences (19)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101506	Enoyl-CoA hydratase/isomerase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	95
2	118705	Enoyl-CoA hydratase/isomerase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	34
5	130497	Enoyl-CoA hydratase/isomerase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: metabolism (GO:0008152)	10

Preceding Unigenes (1)

Unigene	Build
SGN-U217202	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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