Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U570122 in the current build, Tomato 200607 #2

Unigene SGN-U317582

Unigene Basic Information

Unigene ID:	SGN-U317582
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	317582
mRNA sequence:	Length: 2096 bp

>SGN-U317582 Tomato 200607 #1 (20 members)
CTCTCTTCACGTGCTGATCATCAACTTATCATGTGACTAAACCCCTCTATTCTCGGTGCCTCCTTCTTTGGCGGCCTCTCTTTCCTTTTT
GTGTTCTCACTTTCTTCCATTACATTCACTAATAATTACTATCTAGCTCATATTTGTTATCCCTTTTACTTATCTAAAAAAAAGATTTGA
TTTTTTCAAACACCCATTCTTGATTCTTGTGTGTTTGAGTTAAAGAGTTTACCGAGTGTCTATTTTTGTCTATGTGAGCTGATGAAAAAT
GGGCTGTTTACAGTCCAAAACTGTAAATGTTCAGTCCCCTGATAAAGAACCTTCTCAAGATGACTCAAAAACAGATCTTGCTAATGGGGA
TCAAGTAGACCAAGATCAAGTGCCTGTATTCAAGGAATTTAGTCTTGCGGAACTCCGGGCAGCAACAAATGGCTTTAGCAGTGAATTAAT
AGTTTCTGAAAGTGGTGAGAAAGCTCCCAATGTTGTCTACAGAGGGAAGCTTCGTAGCAACAGGCTAGCTGCCATCAAGCGCTTCTCCAG
ACAATCGTGGCCTGATGCCCAACAGTTTGTGGCAGAGGCAGCTGGAGTTGGCAAGGTTCGGCATAAGAGATTGGTGAATCTAATTGGCTG
TTGTGCAGAGGGAGATGAGCGCCTATTGGTTGCAGAATACATGCCTAATGATACTCTCTCGAAGCATCTCTTCCACTGGGAGAAACAACC
GTTGCCGTGGGAGATGCGAGTAAGAGTTGCATACTATATTGCTCAGGCTCTGGATCATTGCAATACTGAAAACAGAAAAATATATCATGA
TTTGAATGCTTACAGAATTCTTTTTGATGAGGAAGGTGACCCTCGATTGTCTAGTTTTGGTCTAATGAAAAATAGCAGAGATGGAAAGAG
CTATAGCACCAATCTTGCTTATACACCTCCTGAGTTTTTGCGCACAGGCCGAGTAATCGCAGAAAGTGTGATGTACAGCTATGGGACTGT
TCTGCTGGACCTGTTGAGTGGAAAACATATCCCACCAAGCCATGCACTAGACTTAATTAGGGGTAAAAATGTATTGTTATTAATGGATTC
ATCCTTGGAAGGACAATATGCCAATGAAGATGCAACAGCATTGGTTGAACTTGCTTCAAAGTGTCTCCAATATGAGGCAAGGGATCGACC
TGAAATTAAGTTCATTCTAAATGCAGTGGAGCCCCTTCAAAAGCAGAAGGAGGCCGCGTCACATGTCCTGATGGGTCTAACAAAAACTCC
AGTGGTGCTTCCAACCATGCTCTCACCTCTAGGAAAGGCTTGTGCGAGGATGGACCTCACTGCTGTCCATGATATCTTGCTCAAAACAGG
TTATAAAGATGAGGAGGGTGCTGAAAATGAGCTCTCATTCCAAGAATGGACACAACAAGTTCAAGATATGTTGAATACCAAGAAATTTGG
GGATATTGCTTTTCGGGACAAGGATTTTAAGAATGCAGTTGACTATTACTCTAAGTTAGTATCAATGATGTCTGTTCCTTCTGGCACTGT
TTTCGTGAGGCGAGCCCTTTCCTACATGATGAATGGCCAACCAGAACTCGCACTAAGGGACGCTACGCAAGCCCAGGTGTGCTTGCCCGA
GTGGCCTACTGCATTTTATATGCAGGCTCTTGCCCTATCCAAGCTTGGTATGGAAACTGATGCACAAGACATGCTCAATGATGGTGCCTC
CTTTGAAGCAAAGAAGTTAAACAGTTGGCGTAACTGATTCTGGCACGTTTCATGTGTCAAGAACCTCACAGCCTATAATGCAGCTAGAGG
TAGCTATAGTAAGGATGAGATAGGAGGAGGAACCAAAGGTAATGTGGTGTTTGGGGATTATATTTATCTCGTCCCTTGCTCTTCTGTAGC
CAATACAGTTCCATACAGAAAATGTATAAATCACTCTAGTGAAAACCCTCGTAGTTTATTCTGCGATGAATGCCAATTTTTAGTTTTGAA
ACTCATCAAGAGTTCTTTCATTGGTCATGTTTAAGGGTAAACATTACTGCCAAGGCTTGGGTTGTTATTTACAGTTATTTTACCAGTTAA
TCAATCGTATTATGCAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1

mRNA member sequences (20)

Alignment image suppressed for unigene with 20 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118620	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	42
5	129097	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	41

Preceding Unigenes (1)

Unigene	Build
SGN-U216812	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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