Sol Genomics Network

Unigene SGN-U563321

Unigene Basic Information

Unigene ID:	SGN-U563321
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1565 bp

>SGN-U563321 Tomato 200607 #2 (47 members)
CCATATAAAATTTCTTTGTTCTACAGTTAACTAGAACAGAGAGAAAGAAGGTGAAGTGAGCTTTGATCTAAGATTTTTCCATTTCAATGG
CGACCATCAATGGCTTAACCTCACCACACCCCTTTCTCTCTCTAAAAAAATCCAACTCAAAGCCCTTTCTCTCTCTGTCAAAACCCATGA
AGTCTCAATTCTTATTCAAAGGTCTTAAACAGCAGAATCAGCAGTTGAGAGATTGGGCTGTAGTGGGTTCGGTATCAAACGAAGCCGACG
AGATTCGGGTCCAAAGTTCTGACGTTATGGACCAGCAAAATGGGGTTGTAATTGGGTTGGAAAGAGAACCGAAATTAGGGGGCGGAGATA
TGGGTATTGTAAATCAGGTGGTGGGTGGGTTTGGAAATGAAGGGAGGTTGTCGTTTGAAGGTGGTGGTGGGTTTTCTTCGGCAAGTGGTG
TTGGTGGATCAGAGAGTAAAGAGGAGGATGTGGAGAAACTTATTGATAGAACTATAAATGCAACTATTGTGTTAGCTGCTGGATCTTTTG
CTATTACTAAATTGCTCACTATTGATCATGATTACTGGCATGGATGGACCTTATTTGAGATATTGAGATATGCACCTCAGCACAACTGGG
TTGCATACGAGGAAGCGCTTAAAAGAAATCCAGTTTTGGCTAAAATGGTTATCAGTGGAGTGGTTTACTCTGTTGGGGATTGGATTGCAC
AGTGTTATGAAGGGAAGCCTCTTTTTGAAATCGATCGTGCACGTATGTTGAGATCAGGCTTAGTTGGATTCACGCTACATGGATCCCTCT
CTCATTATTATTATCAGTTCTGTGAGGCACTGTTTCCATTCGAAGATTGGTGGGTGGTTCCTGTCAAGGTTGCCTTTGATCAAACTGTTT
GGTCAGCAATTTGGAACAGCATCTACTTCACAGTTTTGGGAATTTTACGTCTTGAATCCCCTCTTGCTATTTTCAGTGAATTGAAGGCTA
CGTTCTTGCCAATGTTGACGGCTGGTTGGAAGCTGTGGCCATTTGCTCATCTAATTACATATGGTGTAATTCCGGTTGAACAAAGGCTTC
TTTGGGTTGACTGTGTAGAACTCGTTTGGGTGACAATACTCTCAACTTATTCAAATGAGAAATCAGAATCTAGAGTCTCTGAGGTGATCG
TAGAAGCAGAGGCGCAACCTCCCTCAGTAAGCCCACCACAGGAGTAAATGAATCGAAGAGCAATGACACAACCAAAATTTGAGGAAATGT
ATAGCTTTGAGGTGATATAGCTGCAGATACTTGCTGTACCATACGCTCAGTAAACGTCCTCTGAGATACTCGTTTATAATTTATGCATAC
AGCACGCAGCCCTCCTTCCTCCGCGTATGTACACAAATTCTTTTATAGTAATTGTAAAATAGTGCAATCGCGACCTCTAATGTTCATGCT
GAAGTTTCTGTTGAAACTTCCATAATAGAAGTATATAGCTTATAACATAATATTAACTATCTTTGAAGGATCATGAAATATGAATGAAGT
GAACTGGTGGTTCAAGCCTGAACAACCAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc07g063430	Solyc07g063430

Genomic locations (0)

None

Library representation (17)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	5
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	10
Solanum lycopersicum	LB	Leaf Mature leaves	3316	3
Solanum lycopersicum	LC	Leaf Mature leaves	5712	5
Solanum lycopersicum	LeMiToFr02	fruit	18697	2
Solanum lycopersicum	LeMiToLf01	leaf	30679	5
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (47)

Alignment image suppressed for unigene with 47 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315494	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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