Sol Genomics Network

Unigene SGN-U569783

Unigene Basic Information

Unigene ID:	SGN-U569783
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1670 bp

>SGN-U569783 Tomato 200607 #2 (86 members)
GATTTTCCTATTGGATGCCCTAAAATGAGGGATGGCTCATTTTTTGGGAGGGATATTATTTATTGGTGAACGGTTGATTGGGCAGTACAA
AAGAGTGGAAATTGTTTTAGGTCGAAATAGAAAAAGGAGGTATTCGGAGAGCGAGACGAGATTCTTCATTTGCCTTCTCTGATCTCCGAT
CTCCGATCTCCGATCTCCGATCTCCGATCTCAATCTGAATCTGTGTCAATGGAGAACTCCCGCCGTCAGTCTCTTCTTCCAAGCTTTCTC
TACTCCCCAACATCTTCTTTTTCTTCTTTAACTCCCAAAACCCTTGCTGTTCCAGAAACCACCAGTGTTCCCAACAACAACCTCATTATT
CCGGCACCTAATGAACCTGGCAAGATCGAGATGTACTCCCCGCAGTTTTACGCTGCCTGTACCTTCGGTGGTATCCTCAGTTGTGGTCTC
ACTCACATGGCTGTCACTCCACTCGATCTCGTCAAATGTAACATGCAGATTGACCCTGCGAAATACAAGAGCATATCGTCTGGATTCGGC
GTCCTTCTTAAGGAGCAAGGTCCCAGGGGATTCTTCAGGGGATGGGTTCCTACCCTGTTAGGTTACAGTGCTCAGGGTGCATGCAAGTTT
GGATTCTATGAATTCTTCAAGAAGTACTACTCGGACCTCGCCGGAGCAGAAAATGCTGCAAAATACAAAACTCTGATATACCTTGCTGGT
TCTGCATCTGCTGAAGTGATTGCAGATATTGCTCTTTGCCCATTTGAAGCTGTAAAGGTTCGTGTTCAGACACAGCCTGGTTTCGCTAGG
GGATTGTCTGATGGATTGCCGAAATTTGTTAGATCTGAAGGTCCCATGGGCTTGTACAAAGGCTTGGTACCTCTTTGGGGACGTCAGATT
CCATATACAATGATGAAGTTTGCGTCCTTTGAGACTATTGTGGAGATGATCTACAAGCATGCAGTCCCAAAGCCTAAAAACGAGTGCAGC
AAATCTATGCAACTTGGTATTAGTTTTGCTGGTGGATATATAGCTGGTGTCTTCTGTGCCATTGTATCCCATCCTGCTGACAATCTTGTC
TCGTTCCTCAACAATGCGAAGGGTGCAACTGTTGGTGATGCCGTAAAGAAGATAGGAGTATTGGGCCTCTTTACCCGTGGTCTACCTCTA
CGTATTGTCATGATTGGAACTCTTACTGGTGCTCAATGGGGAATCTATGATGCTTTCAAGGTTTTTGTTGGGCTGCCAACAACTGGTGGT
GTTGCTCCTGCTGTACCTGCTGACTCTGAGGTTGCGAAGGTGTAGGATTGAGAACAAATTAATTCTTCACCAAGTTTAAAAGTAGACTTC
TCCAGATTAAACAATAAACATAGATTGCAGATGTTCCTTTAGTGCTCTTTCGTAGTAAGCAAGCTGGAGAGTGTTCTTTCGCTCAACAAT
CTTTACAATTTTATATTTCTCTGATTTTCAAATTTTTGGAGAGGGGGAGTTCCCCTAAAACTTAAGCATTGCGGATGTCTTTTTTTGTTA
GAACAGATACAAAATCAATTTGATGCTAAGCTTTTCCCATTCGAGATGGGAATAACAAAGTAAAAAAAAAAAAAAAATATGATTTGCTTT
GTTCATTTTAACTGTCTGATGTACCCTTTAAAGGGCTAAAAAAGCTTTCC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc02g094470	Solyc02g094470

Genomic locations (0)

None

Library representation (26)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	5
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	7
Solanum lycopersicum	LeMiToLf01	leaf	30679	9
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	6
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	10
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	3
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum lycopersicum	cTSC	seed	2256	1
Solanum lycopersicum	cTSD	seed	1504	1
Solanum lycopersicum	vSlycmRNA		8362	3
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	12

mRNA member sequences (86)

Alignment image suppressed for unigene with 86 aligned sequences.
[Show Image]

Markers Information (1)

Expression Data (4)

Annotations (manual: 3 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U313451	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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