Sol Genomics Network

Unigene SGN-U577733

Unigene Basic Information

Unigene ID:	SGN-U577733
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1399 bp

>SGN-U577733 Tomato 200607 #2 (55 members)
TTTTTTTTTTTTTTTTTAGATGACTAACTATAAGTACCAATTCTATTATTAATAACAATTAGATAATGTAGAACATTTATACAAGAAAAA
ACAAATAGTTTATAGTAGCATAGCGAGACATGAAATTTATAAAAGGAGTGACTTGAAAATGTGGAAGGTAATTTATTGCCTCAAGGGTAG
AGGATCAACTACTTACAAGTGTAGTAGTGGGCTCACACCACAAAACCCAGATTCAAATATTGAATGGAACTTTTACCACCCAATCAAAGC
ACGGATGAGCTCGATTATATCACCATTTAATAGGGCTTTGAGAAATCGCGCCTTGCCAGCTGTATAAGGTGGATATCTTGCAGGTACATC
CCCAGCAAAACTGCGACGTAAAACTGCCTTCTTATGGCTGAAAGCATCAAACGAAAATTTGCCATGATATGAACCCATTCCACTTTCCCC
TACTCCTCCAAATGGAAGAGTAGAAAGAAAACTTTGCTGCTGAAATCGCTGGAGGCAACTGTGTGATTTCTCTCACAACTTCACCAATCT
TCTTCCAGCAGCCATGATTATCTCAGAGAAGAACCGTAGAGAGATCTCCAAATACCTCTTCCAAGAGGGAGTATGCTACGCGAAGAAGGA
TTACAACTTGGCCAAGCATCCGTTAATCGATGTGCCAAATCTACAGGTTATCAAACTGATGCAGAGCTTCAAATCTAAGGAGTATGTTCG
CGAGACATTCGCTTGGATGCACTACTACTGGTACCTTACAAATGATGGCATTGAGTTCCTCAGGACTTACCTTAACCTTCCATCTGAAAT
TGTCCCGGCTACACTGAAGAAATCTGCCAAACCCCTTGGTCGTCCCATGGGTGGCCCTCCAGGCGATCGTCCACGTGGACCACCAAGGTT
TGAGGGTGATAGGCCAAGGTTTGGTGACAGAGATGGTTACCGTGCTGGACCTAGAGGTCCACCTGGTGAGTTTGGAGGTGAGAAAGGTGG
CGCTCCAGCTGACTACCAGCCTGCTTTCAGGGGTTCTGGTGGAAGACCTGGATTCGGCCGTGGATCTGGAGGTTTTGGCGGCGGTGCACC
TACTAGTTCAAGCTTCTCTTAGATTCGTGCCATCTTAGACTTGGTGGTTGTTTCAAATTTTGAAATCAGATGTTGAAATCACTTGGACTT
TAATTTTCTAGTTAAAACTTAATATTCCGAGCCGGGCAATTTTATCTTTGTTTATCTTTAGAGAACTATTAAGTTTTGTTCTGTTCCTTG
TTCCTTTGTGTCTTTTGAGATATACTTTCAAGTTATTCCGATGTGACAGTGTCAGGCACTTTATATGTTGTTGATGTTTCTAATCTCTCT
CTCTGTTAAATTATTAATGATATGATGAAATTGTACCATTACTGAGTTA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
db212	meloidogyne-induced giant cell protein db212

Genomic locations (0)

None

Library representation (26)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	6
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	6
Solanum lycopersicum	LePS	root 5 weeks old plants	823	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	5
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	cTSC	seed	2256	2
Solanum lycopersicum	cTSD	seed	1504	2
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	5
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	2

mRNA member sequences (55)

Alignment image suppressed for unigene with 55 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U314302	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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