Sol Genomics Network

Unigene SGN-U577907

Unigene Basic Information

Unigene ID:	SGN-U577907
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1563 bp

>SGN-U577907 Tomato 200607 #2 (110 members)
CCTATATACAACAAACACTCGTGATTATCTTTTTTTGTAAATTGATCGTATAACAAAAGCTTAGTGCATCGACCCGATCTTTCTGACTCC
CAAATTAGTTAAGTCCACGCGCTACACGTCTTGGTAAACTTCTTCGCCCCTTCTCTCTCCCTTCCCACTCTCTTCTTCTCCATCTCACCT
ATAACTTCTCCAGTTTTACATATATATATATACCTATAACTTCACCAAAATCATCTAATTCTCTCTGAAATTCAGTTTTCTCATCTGGGT
CTGTCTTGTTTTTGATCATTCTTGAGTTTTTCTCTTGTGGGTATTCCTTGATTTTGCTCAAAACCGTCAAATTTTGAATCTTTTTGTTGT
GGGTCTGTGTCGTTTTGCTCAAAGTTTGAATCTTTCTATTGTGGGTGTCTCTTGAAACCCTTGAAAAATGGTGCGGTGTAGTAACAATTT
AGTGGGGATTCTGAATATAGTGACACTTTTGCTGTCGATCCCAATTATAGGAGGAGGGATATGGTTGTCAAAACAAGCAAATACAGAGTG
TGAGAGGTTTCTTGAAAAGCCAGTAATAGCAATAGGTGTTTTTATATTGCTTGTTTCATTGGCTGGTATAATTGGATCTTGCTGTAGAGT
TACTTGGTTACTTTGGGTTTATCTACTTGTTATGTTTTTGTTGATTTTGTTGCTTTTCTGTTTCACAATCTTTGCTTTTGTGGTGACTAA
TAAGGGTGCTGGTGAAACAATTTCTGGTAGAGGGTATAAGGAGTATAGATTTGGGGATTACTCTAATTGGTTGCAGAAAAGAGTTGATAA
GCATTGGAATAGAATTCATAGTTGTTTGCAGGATAGTAAGATTTGTGATACTTTGATTCAGGAATCAAATACTAAAGCTGATGATTTCTT
CAAGAAACATCTATCTGCTCTTCAGTCTGGTTGCTGCAAGCCATCAAATGACTGTAACTTCCAGTACGTGAGCCCAACAAACTGGACAAG
ATCATCGACCTCATCCACTACCAATCCAGACTGTGCTACATGGAGCAACGAGTCAAATTTATTGTGCTATGGCTGCCAATCCTGCAAAGC
TGGGCTGCTAGACAACATCAAAAGTGACTGGAAGAGGGTAGCTGTGCTCAACATCATTTTCCTCATCTTCCTCATCATCGTCTACTCTAT
CGGATGTTGTGCTTTCAGGAACAACCGAGAGGACAATGCTTGGAAGCGTTATCCTTAAACACTCTCTGTTGAGTCTCGACTGCTTTATGT
TGCGTATCGTATTAGACTATAGATCACTTAGTATGAGTTTATGCTCTTTCTTGTACAGAGTGTATTTCTTCTGCTAGACAATTTACTTGT
GGCTTTTGGATATATGTGAATTCCTATTATTGAATTCTTTGTTTAGAATTGTCTTCTTGATTAGATGGAGTCTTTCATCTCCATTTTTTT
CTGTTGAACAAATTTGTGTTAGATTTGTATGGTGGAGAATTTTGCATTTCTTGATATTTTGTGGGATACACTCGTGTTTGGTATCTGTAT
TGAGGTTTGATTAAGTTTAGAAAAATTCATATC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc07g006280	Solyc07g006280

Genomic locations (0)

None

Library representation (27)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	10
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	4
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	10
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	5
Solanum lycopersicum	LeMiToFr02	fruit	18697	4
Solanum lycopersicum	LeMiToLf01	leaf	30679	3
Solanum lycopersicum	LePS	root 5 weeks old plants	823	1
Solanum lycopersicum	Sl_RootInf01	root and collar Three weeks old	385	1
Solanum lycopersicum	Sl_RootInf02	root and collar Three weeks old	333	2
Solanum lycopersicum	Sl_RootSSH02	root	152	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	7
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	19
Solanum lycopersicum	cLEE	seeds and maturing carpels 5 days post-anthesis to fruit over-ripe stage	547	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	11
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	10
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (110)

Alignment image suppressed for unigene with 110 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 1 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312362	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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