Sol Genomics Network

Unigene SGN-U585696

Unigene Basic Information

Unigene ID:	SGN-U585696
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1300 bp

>SGN-U585696 Tomato 200607 #2 (30 members)
ATGTTGCAATATTGAAATTGGCACCCCCAAACAAGACAAAATAAATAAAAGCCCTAGAATTAGGTGATTAGTATAATCATTGAATCAAAT
CGTATTCCCCTCCTTCTCGAAGTTGCAGCAACAGAGTAGAATCAATGTCCTCACGCGATACCAAGAAACCCTCTAGGCAAACCTCCGGTA
ACCGTGCCGGTGGAATTCGTACACTTTCCGATCTCAACCGTCCATCAGGTCACGATTCCGACAGCGATTCCGATGGTCCCCAAGAATACT
ACACCGGCGGTGAGAAAAGTGGAATGCTTGTTCAAGATCCTTCAAAGCATAATGATGTGGACTCCATCTTTGACCGAGCTAGGCAAGTGG
GTGCCACACAAGGTCCTTTGGAAAGTGTCGTCCCTAGTTCAAGCTCAACAAGCTTTACTGGATCTGCAAGAACACTTGCAGGGGAGACAG
TGCCAACATCAGCTCCTCAACCGCCCGAGTCCATCGTGCACAATATTGTCTTTTGGAGAAATGGTTTCACTGTAAATGATGGTCCTTTAC
GAAGGCTGGATGATCCTGAAAATGCATCTTTTCTGGAGAGTATCACAAAGTCTGAATGTCCTAGAGAGTTGGCTCCTGCAGATACCAGGT
CCCAGGTGCATTGCAACCTCATAAGAAGGGATGAGAACTGTCCTGAACCAGAGAAACGCCAAGTTTCGTTTCAGGGAGTGGGAAGAACAC
TTGGAAGCAGCGCAACTCAAGCAACTTCTGAGCCATCTGCTTCTGCTCCCACAAGCAGAGTCCCAGCAGCTTCCACAAGTGTTCTGGATG
AATCATTGCCTTCGACCTCGCTTCAAATTAGATTGGCAGATGGAAGTCGCATGGTTGCACACTTCAACTTCCACCAAACTGTTGGCGACA
TCCGTGCCTTCATTGATGCTTCAAGGCCAAGTGACACCAGGGCATATCAACTACAAACTGTTGGATTTCCTCCTAAAATGCTCAGTGACC
CAACCCAAACGATTGAGCAAGCAGGACTGGCAAATTCAGTGGTTATACAAAAATTTTAATGTGCTCTGCCAAAACTCTCTTTTCGTTTTA
TTATTTCCAGATGTTTCGATCTATTTACTACTGGATATTAATTTTTAATCTATGTGAATCTAAAGCTGTACCAAGATAGCAGCAGGTGTT
GTTTAAAATTCATTTTTTCTTAAACTCAACGTTGCACGGGTATTGTCCCCTAATTATGTGTCATATGGTACTTTNTTCATTTCCTGTAAG
AACAACTGCTGTGTGGAAATGAAGTAGAATGGTTTGTNTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc02g081140	Solyc02g081140

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	2
Solanum lycopersicum	LePS	root 5 weeks old plants	823	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2

mRNA member sequences (30)

Alignment image suppressed for unigene with 30 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (8)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U316596	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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