Sol Genomics Network

Unigene SGN-U565144

Unigene Basic Information

Unigene ID:	SGN-U565144
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2622 bp

>SGN-U565144 Tomato 200607 #2 (48 members)
AAGGAGAGATTTGCATACATTTCTTTATTTTTTATTTTATTTGGCAAGTGAATCCATAAATAGAGAAAAACACGCTTATTGTCTGATTCA
CTCTCTATAAAGGCCGAAGCACTCGGCGATTTTGTACTCTTTTTTTCTTCTTCTTCTCTCTCAGTTGGGGTGGATCCTGATCGGGATTTG
AATCAAAGCTGTTTCAAGATGTCAACATACACCCCAAAGAATATACTCATTACTGGAGCTGCCGGATTTATTGCATGTCATGTAGCCAAC
AGGCTTGTTCGGAGCTACCCTGATTACAAGATTGTTGTCCTTGACAAACTTGACTATTGTTCAAGTTTGAAGAACCTCATTCCTTCCCGA
TCTTCCCCTAATTTCAAGTTTGTTAAGGGAGACATTGCTAGTGCAGATCTTGTTAACTACCTTCTCATTACTGAGTCCATTGACACTATA
ATGCACTTTGCTGCTCAGACCCATGTTGATAACTCCTTTGGTAATAGCTTTGAGTTCACTAAGAATAACATCTATGGTACCCATGTACTA
TTAGAGGCCTGCAAAGTGACTGGTCAGATCAGAAGGTTTATCCATGTGAGTACGGATGAGGTTTATGGGGAGACTGATGAGGATGCTGTT
GTAGGAAACCACGAAGCCTCACAACTCCTTCCCACTAACCCATATTCAGCCACAAAAGCTGGGGCTGAAATGCTTGTTATGGCTTATGGT
AGATCATATGGGTTACCTGTTATAACCACTAGAGGTAACAATGTCTATGGTCCTAACCAATTTCCTGAGAAACTAATCCCTAAGTTTATA
CTTTTAGCCATGAGGGGAAAGCCTCTTCCTATTCACGGGGATGGTTGTAATGTTCGTAGTTATCTCTACTGTGAGGATGTTGCTGAGGCT
TTTGAATGTGTTCTACACAAGGGAGAGGTCGGTCACGTTTATAACATTGGAACTACAAAAGAGAGAAGAGTGATTGATGTTGCCCAAGAT
ATATGCAAACTCTTTGACATAGATTCAGACAAAGTTATTCAGTTTGTGGAGAACAGGCCGTTTAATGACCAAAGGTACTTTCTGGATGAT
CAGAAGTTGAAGAACTTGGGTTGGTCTGAGACGACCAGGTGGGAAGAGGGTCTGAAAAAGACTATTGAATGGTATAAGAATAACCCTGAT
TGGTGGGGGGATGTCTCGGGAGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGATATAGAAAGAAATTTGGATGGAGCTGAG
AAATATGATTCTGGATCTACCGAATTCTCAGGGAAGTCCAACGAAACCAAAACGGCAGCTCCAGCTTCAAAGACCAGCAATGTGCCTCAG
AAATCCCCTTTTAAGTTCTTGATCTATGGTAGGACTGGGTGGATTGGCGGTGTGCTAGGGAAATTGTGTGAGAAACAGGGTATTCCTTAT
GAGTATGGCAAGGGACGTTTGGAAGATCGCTCAAAGCTTTTGGCAGACATTAATTCTGTCAAGCCCACACATGTATTCAATGCTGCTGGT
GTCACTGGCAGACCCAACGTTGATTGGTGTGAGAGTCACAAACCAGAAACAATTCGTACAAATGTTGCTGGTACTCTAAACTTGGCAGAT
GTTTGCAGAGAGAATGGACTCCTGATGGTGAACTTTGCCACTGGCTGCATATTTGAGTATGATGCTGCACATCCAGAAGGTTCTGGTATT
GGGTTCAAAGAGGAAGACACACCCAATTTTGCTGGTTCTTTCTATTCAAAGACCAAGGCCATGGTTGAAGATCTGTTGAAAAATTATGAC
AACGTTTGCACACTGAGAGTTCGCATGCCAATATCTTCAGATCTCAGCAACCCTCGCAATTTCATTACCAAGATCAGCCGCTATAATAAG
GTGGTCAATATTCCTAACAGTATGACCATATTGGATGAGCTTCTTCCTATTTCAATTGAGATGGCAAAGCGTAATCTCAGAGGCATATGG
AATTTCACAAACCCGGGTGTTGTGAGCCATAATGAGATATTGGAAATGTACAAGAAATATATCGATCCAGCATTTACTTATGCCAACTTC
ACGGTGGAAGAGCAGGCCAAGGTAATCGTTGCAGCTCGCAGTAACAATGAGATGGATGCATCAAAGTTGAAGAAAGAGTTCCCCGAGTTG
CTATCAATTAAAGAGTCGCTGATCAAGTACGTTTTTGAACCAAACAAGAAAACCTCTGCATAAAAAGGCCGTGTTCTCAGGAATTGTGTA
TGCTATTTTAGCTATTATTTCATTATTAGTTCCTCGAATTCGCTAGATATTCATTAGTGATTTAGCTGTTGTTCCTTGTTATTTTTGTAT
GAATTCATAATCTGTGCCTTCTTTGGGGAAGATTTGGAATATTGGATAGGCTGTGTTCCCTGTATCTGTTGTTAAATGAGTTTGTGTTAA
AGATCTTGTGTACTTTGTTGACTTTGATATATGGATGTATGAACTTTTTCTTGCTCAAAAAAAAAGGACAAATAAGCCCTTAATAATTCC
TCCACTTTCTAAGGCATCTGAGAAAACCTTGAATGTGGTATTGGAGAAAATGTCGGACACATCTCGCAATTCAACATCAAAACGAGTATC
TGGTCTGTCTGA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc10g007480	Solyc10g007480

Genomic locations (0)

None

Library representation (23)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	7
Solanum lycopersicum	LeMiToLf01	leaf	30679	7
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	4
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	4
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	cTSC	seed	2256	2
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (48)

Alignment image suppressed for unigene with 48 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 2 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U316145	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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