Sol Genomics Network

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Unigene SGN-U584412

Unigene Basic Information

Unigene ID:	SGN-U584412
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1412 bp

>SGN-U584412 Tomato 200607 #2 (161 members)
GGTCAATTTTATCATTATCTGTGTCACACACAAAAACCCTTTTGATTTTTCTCTAACCCCAAATCTCCCCATTTACTCAAATAATCTCAC
CTTTTTCTTTTTTCACTTCTCTATCTCTTTGCAGCCATGTCTGAGGGAGAGAAGGCTTTGCCGACTGCATCCAAAGATGAGAAGTCTGGG
GCAGCTGAGAGTAAAAAATCTCCTGAGTCTTCTACCGTGGAAGCACCATCAGGAGAGGGGAGAACAGCATCTGCTGCGGCTGGAGCTGGA
GTCCAAAATCCCTTTGATTTCTCAGCCATGTCTGGACTGCTCAATGACCCAAGTATCAAAGAACTAGCGGAGCAGATTGCAAAAGACCCT
GCATTTAATCAGATGGCAGAGCAGCTTCAGAAGACCTTTCAAGGTGCAGCAGTGGAAGAAAGTGTTCCCAACTTTGATAGCCAACAATAC
TACTCTACAATGCAACAGGTTATGCAAAATCCTCAGTTTATGACCATGGCTGAGCGGCTTGGTAATGCATTGATGCAGGATCCATCCATG
TCTGGCATGCTTGAGAGTTTGTCAAACCCTGCTCAGAAGGAGCAACTTGAAGAACGGATGGCGCGCATTAAAGAAGACCCATCACTCAAA
CCAATCTTGGAAGAGATAGAGAGCGGAGGACCAGCTGCAATGATGAGGTATTGGAACGATCAAGATGTTCTGAAGAAGATTGGTGAAGCA
ATGGGTTTTGCTGCTGGAGGAGAGGGTGCTACCTCTTCTGAAATACCTGGGCCAGATGAAACGGAAGAGGCAAATGAAGATGAATCTGTT
GTTCATCAGTGTGCTAGTGTTGGTGATGCAGAGGGCTTGAAGGCAGCACTAGCTGCTGGTGCTGACAAAGATGAAGAAGATTCAGAAGGA
AGGACAGCATTGCATTTTGCTTGTGGATATGGCGAGGAGAAGTGTGCTCAGCTCCTTGTTGAAGCTGGGGCAAAGGTTGATGCATTGGAC
AAGAACAAGAATACTGCTCTTCACTATGCTGCTGGATATGGTAGAAAGGAGTGTGTAGCACTGCTGCTGGAGAATGGAGCCGCTGTAACT
CTTCAAAACTTGGACGGAAAGACGCCAATTGATGTTGCCAAACTCAACAACCAGCAGGATGTCCTAAAGCTGCTTGAGAAGGATGCATTT
CTGTGAACTGGCATAGATGTTTGGTCATGTACAATTGAAACTTTGGATGTCACAGAGTGTGATTCAAGACATCTGTACTTTGAGGATCTT
ATCCATACTTCTAGTGTTATCTTTGCCAGTGTATAATTTTATTGTTTTTCTAAGATTGTGCCTGTTCGAAGAATTTCCTCTGGATGTTTT
GTATTTGTAAACATCTTTGCTACCATGTCAAATTAATCTTCAACAATTTTTTTTTCCAATTG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc01g104170	Solyc01g104170

Genomic locations (0)

None

Library representation (36)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	13
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	9
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	3
Solanum lycopersicum	LeCAD	Seedling Two-week-old seedings	428	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	8
Solanum lycopersicum	LePU	Pericarp Turning stage of fruit ripening.	1542	1
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	3
Solanum lycopersicum	Sl_LeafCherry01	epidermis	226	2
Solanum lycopersicum	Sl_RootGC01		128	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	10
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	6
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	7
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	22
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	10
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	6
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	8
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	4
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	3
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	4
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	8
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	2

mRNA member sequences (161)

Alignment image suppressed for unigene with 161 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U312863	Tomato 200607 #1
SGN-U333982	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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