Sol Genomics Network

Unigene SGN-U581375

Unigene Basic Information

Unigene ID:	SGN-U581375
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1137 bp

>SGN-U581375 Tomato 200607 #2 (231 members)
GCTTTTTTTTTATTACTATATCGAAAATAAAAAAATCTTAATCAGCGTAACGTCCGTGTTTGTAATTGCTATAAAAGGCGATTGGCGGCC
AATCGGCCGAATTGACATCCAATTCAATATTCAAACTTTCACTTGTTGATAATATCTTTTTGATTGAAAAAAAGAAGAAGAAGTATGGCT
GATCAATACGAACAGAACAAGGCATCCGTTGAAGAGACTGTTGGTACCAACGTGGAAGCTACTGATCGTGGTTTGTTTGATTTCATTGGA
AAAAAAGAAGAGGAAAAACCAAGTCATGCTCATGAAGAAGAGGCAATTTCATCTGAGTTGTCTGAAAAAGTTAACGTAAGTGAAGAAGTG
GAACCCAAGGAGGAGGAAAAGAAACTTCATCGATCAAATAGCAGCTCTAGTAGCTCCAGTGATGAGGAGGAAGAAATTGGAGAGGATGGA
CAGAAGATCAAGAAGAAGAAAAAGAAGGGATTGAAGGATAAGATTAAGGAAAAAATATCTGGTGATCACAAGGAAGAATCGAAAGCAGAG
GATACCTCAGTTCCAGTTGAGAAATACGAGGAAACAGAGGAGAAAAAAGGATTTCTAGACAAAATTAAGGAGAAATTGCCAGGTGGCGGG
CATAAGAAGACGGAGGAAGTGGCGGCGCCACCACCACCACCACCGGCTGCGGTGGAGCATGAGGCGGAGGGGAAGGAGAAGAAGGGATTT
TTGGACAAAATTAAGGAGAAATTACCAGGATACCACTCAAAGGCTGAAGAGGAAAAGGAGAAGGAAAAAGACTAAATGAAATGAAATGTT
TTTTTAATTTTACTTTTGGGATGTTATGATTGTGTTTCTGTGTTGTTTTGGTTTTTAAGTGTTTTTCATTTCCTTCACTTTTGTTTTTTT
TGGATTCTGAAGGATAATTGTTAGTACTGTATTTGATATTTCTGTATGTAAGTGCATATGTATGTGCCTTATGTGTATGAAGTTTGATAA
TATGGATTTGTAAAATGCAGTTGATTTTATCCTTATTGACTTCTTTGTTTTATGGTTAAGTTGTTTCATTTCCAACTCTGTTATATGAAA
ACGTATTGTTCAAAACATATCGAGTTATTATATATAAATGCAAATCTTAGAGATATT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
dhn	dehydrin

Genomic locations (0)

None

Library representation (37)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	30
Solanum lycopersicum	LA	Leaf Mature leaves	6589	3
Solanum lycopersicum	LB	Leaf Mature leaves	3316	3
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	3
Solanum lycopersicum	LeHSU	shoots Three weeks old	122	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	4
Solanum lycopersicum	LeMiToLf01	leaf	30679	2
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	4
Solanum lycopersicum	Sl_FruitQTL	late maturation (breaker and red ripe)	663	1
Solanum lycopersicum	Sl_RootGC01		128	1
Solanum lycopersicum	Sl_RootInf01	root and collar Three weeks old	385	2
Solanum lycopersicum	Sl_RootInf02	root and collar Three weeks old	333	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	34
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	7
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	23
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	7
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	39
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	4
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	4
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	9
Solanum lycopersicum	cLES	leaf 4 weeks	5243	4
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	6
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	9
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	4
Solanum lycopersicum	cTOS	suspension cultures	8026	6
Solanum lycopersicum	cTSC	seed	2256	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (231)

Alignment image suppressed for unigene with 231 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (26)

Annotations (manual: 4 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U313320	Tomato 200607 #1
SGN-U313321	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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