Sol Genomics Network

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Unigene SGN-U572089

Unigene Basic Information

Unigene ID:	SGN-U572089
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1407 bp

>SGN-U572089 Tomato 200607 #2 (35 members)
AAAGATGCTTTGATTTTCTCATGTGTCCCATAGTTCTTTCTATGGGATGCAGCATAGACGTATGAGAATCACAACTCAGATTTAGCAATT
CAACAACTCTCTGTCTCAAAGTCTCATCTCTCTCTAACTAAGGGAGAGAGAGAATGGATACTGTGTTTTCAGTGGATGAGATTGCCGATC
AATTATGGTCATCGCCGCCACCGATGAGGTTATCTCATGACTTGGATTCTTCTTCCGCCACTTCGTCCTCTAAAATGATGAACAGGAGCT
CGTCGGAGTGGGCTTTTCAGCGTTTCCTTCAGGAGGCTGCAGCAGCTGAAACTACTTCCTCGTCTTCTTCACAGCAGATCAAGCTTAATC
ATAATTTAATTCCTGATCAATCGAAGCCTGTGTCATCGTTTGTCTCTGAACCTCCGATTGATTCCGATGAACATCAGGCTTTCCTCAAAA
GACGCCTGGATTTGGCATGTGCCGCCTTCGCTTTGAATCGTGCAAGCTATATAAAATCTCAAGATTCGGCTTCTTTGCCACCCGAAAAAG
GATCACTGGCAGCTAATGCATCACTCTGTGGATCTCAACTTCCTCCAAAAGGATCTGGGCAAGAATTGGCAAAAGTTCAAGATAAGGATG
CTGGTGAGCCAATTGGAATACCTCCCTTGCCTGCATTGCAGAAGAAACCTGGTATCCAGGTAAGGTCAACGACAAGCGGTTCATCCGGAG
AGCAATCAGAAGATGATGAAGCTGAAGGAGAAGCAGAAACAACTCAATCAACTGATCCAACTGATGTGAAACGTGTGAGGAGAATGCTAT
CCAATAGAGAATCAGCTAGACGCTCGAGAAGAAGAAAACAAGCCCATCTGACAGAACTAGAGACGCAGGTCTCTCAAGTAAGAGTAGAAA
ACTCCTCTTTATTGAAACGCTTGACTGACATAAGCCAGAAGTACAATGAAGCAGCAGTTGACAATAGAGTATTGAAAGCCGATGTTGAGA
CATTGAGAGCAAAGGTGAAGATGGCTGAAGAAACTGTTAAAAGAGTTACTGGGTTGAATCCTCTATTCCAAGCTATGTCTGAGATATCGA
CAGTAATGATGCCATCTTTCACTAGTAGTCCTTTCGACTCATCAGCAGACGCTGCTGTCCCTGAACATGATGACCTGAACTATCCAGCGC
CTGAAAATGGTCATATGCCCAACCATGATTGTAGAATGCAAAACGCGAGAGGCTAGGTTGGAGCATCTGCAGAAGCGCATCTGCGGAGAA
GCAAGTACTTGTGGAAACCAAGGCAAGGGAGAGAAGTAGAATGACTTAATGAGCAGAAGTTACGGCAAGGAAGATTTCACAGAGATCTGT
AAATCTTACATATCAAATTACTTTGAAATAATTAATCTTTTTTTTCTTCAGATAGAC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	3
Solanum lycopersicum	LeMiToLf01	leaf	30679	5
Solanum lycopersicum	Sl_RootInf01	root and collar Three weeks old	385	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2

mRNA member sequences (35)

Alignment image suppressed for unigene with 35 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (7)

Annotations (manual: 4 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315265	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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