Sol Genomics Network

Unigene SGN-U578197

Unigene Basic Information

Unigene ID:	SGN-U578197
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1445 bp

>SGN-U578197 Tomato 200607 #2 (87 members)
TGCGGAAGAAAGAGAAACACGGAGAAGGTGGCACGACGCCGTTTTGTTTCTTCTAAGATATAGGAGGATTTGCTCAGTTCAAGATCTGTA
TAATCGGAATTGAAGAGTTTAGAATCCCTGCAAAAATGTCTTACTACCCTAAAGGCCACCACGATGACGACGGCACTGAATTTGATGAGT
ACGATCCAACTCCTTATGGTGGTGGATACGACATTGCTTTGACTTATGGTCGCCCACTTCCGCCATCTGAGGAAACCTGTTATCAGCCTT
CCTCAGCTTCTGATGAGTTCGACTATGATCGTCCTCAGTACACTTCGTATGCTGAGCCTTCTGCTTATGGTGATGAGGCTCTTGATAATG
AGTACCAGAGCTATTCGAGGCCTAAGCCTCGCCCCACCCCTTCTTATCGTCCATCTGAGGAAACTCATACTTATGAGCAGCCTCAAGCTG
ATTATGGGTTTCAGCCTGGGGTGAATCGCCCTGGCGGAGAAAGTGAATATGGATCTGGGTATGGACGGAAGAGTGAGTATGAAGAAGAGC
CCACATCAGAATATGGATCTGGGTATGGGAGAAAGAGTGAGTACGAAGAGCCTAAACCCCAGTATGGATCTGGGTATGGAAGGAAGAGTG
AGTATGAAGAGCCTAGTTCTGAGTATGGATCTGGGTATGGGAGGAAGAGTGAGTATGAAGAACCCACTCCCCAATATGGATCTGGGTATG
GGAGGAAGAGTGAGTATCAAGAGCCAAGTTCTGAATACGGATCTGGGTATGGGAGAAAGAGTGAATATGAAGAACCCACTCCCCAGTATG
GAAGGAGAAGCGAGTATGAAGAACCCGCTTCCGAATACGGATCAGGGTATCGGAAGAAGAGTGAATACGAGGAGCCAAGCTCTGAATACG
GGTCGGGTTATGGGCGTAGGAACGAATCCGAAGAATACGGATCTGGTGGCTATGGCAGGAAGCCTAGCTATGGACAAGAGGAAGGTGAGA
GGCCGAGTTATGGGCGTCCAAGCTACCAGGCTGAGGAAGGCGAAGGGTACGAGAGGCCTCACTATGGAAGATCCGAGGAGGAGGACTACA
GGAAACCCAGCTACGAGAGGCGTGGTGATGATGATGAAGGCTATGGTCGCAAGAAATATGGTGAGGACAACTCCGACGACGATGACGAGG
AGAAGAAACATCGCTACCACCACCACCGCAAACACTACGATGATTGAGCAGAGAGAGTGAGTGCTTTATGATCCATGTCATACTATCAAT
ACTAAATAAAAGTTGGCATGTTTCTGCAAATGTTGTTCTTTGCGTGTTTGCTATGGATGTGTTGCTTATTTTGTTATTTGTGTGAGGTAT
ATTTTGCCTCCTCTATACTGGAAAACAATATCCCAGACATTTTTCAGGGTAAATATGTCATGAATAAATGAACTCTGTGATTGGTCGTTT
TTTTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc02g088260	Solyc02g088260

Genomic locations (0)

None

Library representation (27)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	12
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	4
Solanum lycopersicum	LC	Leaf Mature leaves	5712	3
Solanum lycopersicum	LeMiToFr02	fruit	18697	5
Solanum lycopersicum	LeMiToLf01	leaf	30679	2
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	7
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	6
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	6
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	4
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOS	suspension cultures	8026	3
Solanum lycopersicum	vSlycmRNA		8362	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (87)

Alignment image suppressed for unigene with 87 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (5)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U313746	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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