Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U580345 in the current build, Tomato 200607 #2

Unigene SGN-U212742

Unigene Basic Information

Unigene ID:	SGN-U212742
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	212742
mRNA sequence:	Length: 1370 bp

>SGN-U212742 Lycopersicon Combined #3 (131 members)
CACACTTGTTAGTTTCTAATAAACAGAAACAAACAGCAGCAGAGAACTGATCAGAAAAACAAAAACAAAATGGCAGCCTCTCTACAAGCA
GCTGCTACTCTTATGCAACCAACTAAGGTTGGTGGTGTCTCTGCCAGAAACAACTTGCCATTGAGGTCAGCTCAAAGTTTGAGCAAGGCA
TTTGGTCTTGAACCATCTGCATCCAAGCTTTCTTGCTCTTTGCAAGCTGATCTTAAAGATTTTGCTCAGAAATGCACTGATGCTGCCAAG
ATTGCAGGATTTGCCCTTGCCACTTCTGCCCTTGTTGTCTCAGGAGCTAATGCTGAAGGAGTTCCAAAACGTCTAACCTTTGATGAGATC
CAGAGCAAGACATACATGGAAGTAAAGGGAACTGGAACAGCAAACCAGTGCCCTACCATAGATGGAGGTGTTGATAGCTTTTCCTTCAAG
CCAGGCAAATACAACGCCAAGAAGTTCTGCTTAGAGCCAACATCATTCACCGTCAAGGCAGAGGGCGTAAGCAAAAATTCAGCCCCAGAC
TTCCAAAAGACCAAGCTTATGACTCGCTTAACCTACACTTTGGATGAGATTGAGGGACCGTTTGAAGTATCTCCTGATGGCACTGTTAAA
TTTGAGGAGAAGGATGGAATTGATTACGCTGCTGTTACTGTCCAGCTTCCTGGTGGTGAGCGTGTTCCGTTCCTCTTCACCATCAAACAA
CTTGTGGCATCTGGAAAGCCTGAGAGCTTCAGTGGCGACTTCCTTGTGCCATCCTACAGAGGTTCATCGTTTCTTGACCCAAAAGGCAGG
GGTGGATCCACTGGTTACGACAATGCTGTTGCATTGCCAGCTGGAGGCAGAGGAGATGAGGAGGAGCTCCAGAAAGAGAACGTAAAGAAT
ACCGCGTCTTTAACAGGAAAGATCACATTTACTGTTACCAAGAGCAACCCACAGACTGGTGAGGTGATTGGAGTGTTTGAGAGCATTCAG
CCATCTGATACTGATCTGGGGGCAAAGACTCCTAAGGATGTAAAAATCCAGGGTATCTGGTATGCCCAGCTTGAATCATAGACAGATCTT
AGACTTTGTGGATCATTTCTTCGTTTTTGATTTTGTTATAAGTTACTACAAGGTTTCAACTTTCTATGACCCAATTGGATAAGTAATGAG
ACAACTATCTTCCTGTATATTAACAAGTATAAGTAATAATCCATTAACAAACTGAGTAAAAAAAAAAAAAAATACTTAGATTTGCTAAGC
GTTCCATCTCAAGAAAGTAAAAAGTTGTATGCTTGCCTAGACTCTGATATAATCGTCGAATCTGTCTCTGTATTTGGCAGCGGTAAGTAT
TGTAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	5
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	4
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	14
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	8
Solanum lycopersicum	cLES	leaf 4 weeks	5243	10
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	33
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	9
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	11
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	4
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	13
Solanum lycopersicum	cTSC	seed	2256	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	7

mRNA member sequences (131)

Alignment image suppressed for unigene with 131 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	68	Tubulin_FtsZ Tubulin Tub_FtsZ_C	172
2	22465	PSII_MSP	28
5	56669	PSII_MSP	27

Preceding Unigenes (1)

Unigene	Build
SGN-U155585	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: